| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1479 |
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| Symbol | |
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| ID | 3694196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 1809665 |
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| End bp | 1812574 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637731733 |
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| Product | hypothetical protein |
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| Protein accession | YP_336636 |
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| Protein GI | 76817859 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.756433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGTCGC GAACGAATCG GCGCATCGCG CGGCCTCGGT GCGCCGATTC GTTCGCGGCG
GCACGCCTTC CCCGTCGCCG TCGCGACAAA GACATATCGC CCGGGCTTCC GCGCGCGCGT
TTTCGCCCCG TCGCGCTCTG CGTCGCCCTC TCATTCCCAC CCCATTTCGC AACAATCCGG
CTGGATTCAC GCGCATCGGA ACCCAGCCGA CTCCGAAACC CGCGCGCCGG TATACTTGGA
CACTTTGCCT TTTCGCAGCC CCCAACCCGC CGCCTCATGC TGACTTCCGT CCTCGTCCGA
CTCGTCGCCT GGTCGGTGCG GCGCCCGATC TGGGTCGTCG TGCTGTCGCT CGTCATCGCC
GCGCTCAGCA GCGTCTACGT CGCGCACCAT TTCAAGATCA ACACCGACAT CAGCAAGCTC
GTCGAGAACG ACCCGAAATG GGCGGCGCTC GGCCGCGCGA TCGACGACGC GTTCCCGCAG
CGCAACCAGA CGATCCTCGC CGTCGTCGAG GCGCCCGCGC CCGAATTCGC CGGCGCCGCC
GCCGACGCGC TCGCCGAGGG CTTGCGCCGC GAGACCGACG CGGGCCGCAT CGGCCAGGTG
TCGGAGCCCG CGGGCGGCCC GCTCTTCGAG CACGACGGGC TGCTGTTCCT GCCCGAGCAG
GACGTCGCGA CGACGACCGC GCAGCTCGCG AGCGCGCGGC CGCTCATTAA CGTGCTCGCG
AAAGACCCGA GCATCGCGGG CCTCGCGACG ACGCTGTCGA CGACGCTCGG CGTGCCGTTG
CAATCGGGGC AGGTCAAGCT CTCGGGCATG GCGAAGCTGC TCTCGCGCAG CGCGGCCACC
GTCGACGACG TGCTCGCCGG CAAGCCGGCC GCGTTCTCGT GGCGCGCGCT CGTCGATGCC
GACGCGGCCC GCGAGCCCGC GCGCGCGTTC GTCACCGTGC AGCCCGTCGT CAACTACGGC
GCGCTGAAGG CGGGCGAGCA GGCTTCGCGC ACGATCCGCG CGACCGCGCA GGCGCTCAAG
CTCGACGAAC GCTTCGGCGC CGCCGTGCGG CTCACGGGCG AGCAGCCGCT CGCCGACGAG
GAATTCGCGT CGGTCCAGGA CGGCGCGCTC GTCAACGGCA TCGCGACGCT CGCGATCGTG
CTCGTGATCC TGTGGATCGC GCTGCGCTCG AAGCGGATGA TCGCGTCCGT GTTCGTCACG
CTGTTCGTCG GCCTGGTCGT CACGGCCGCG CTCGGGCTGA TGATGGTCGG CTCGCTGAAC
ATGATCTCGG TCGCGTTCAT GGTGCTGTTC GTCGGCCTCG GTGTCGATTT CGCGATCCAG
TACGGCGTCA AGTATCGCGA GGAGCGGCAC CGCGATCCGA ATCTCGACCA CGCGCTCGTC
GGCGCCGCGC ACGCGATGGG CATGCCGCTC ACGCTCGCGA CGGCGGCCGT CGCCGCGAGC
TTCTTCTCGT TTCTGCCGAC CGCGTACCGC GGCGTATCGG AGCTCGGCCT GATCGCGGGC
GTCGGGATGT TCGTCGCGCT CTTCACGACG CTCACGCTGC TGCCCGCGCT GCTCAAGCTG
CTCGCACCGC CCGGCGAGCG CAAGCCGCCC GGCTTTCCCC GCCTCGCGCC GGTCGACGAC
TATCTCGACC ATCATCGCAA GCCGATCCTG ATCGGCACGC TCGCCGTCGT GATCGGCGCG
CTGCCGCTCC TCGCGCATCT GCGTTTCGAT TTCAATCCGC TGCATCTGAA GGATCCGCGC
AGCGAATCGA TGGCGACGCT GCTCGCGCTG AAGGATTCGC CGGAGGCGTC GGTCAACGAC
GTGTCGCTGC TCGCGCCGTC GCTCGCGGCC GCGAACGCCG CCGCGCAGCG CCTCGGCGCG
CTGCCCGAAG TCGGCCGCAC GACGACGCTG TCGACCTTCA TTCCCGACGC GCAGCCGCAA
AAGCTCGCGA CGATCGCGGC CGCCGCGCGC GAGCTGCTGC CGGCGCTCAC GCAGCCGGCC
GCCGCGCCCG TGCCCGACGC GCAGCGCGTG GCGGCGCTCA AGCGCGCGTC GAACCTGCTC
GAATACGCAT CCGAGGACTA TCCGGGGCCG GGCGCGGCGG CGGCCAAGCA TCTGTCGGAA
TCGCTCGCGA AGCTCGCCGC CGCCGATGCG GCGACGCGCG AGCGCGCGGA GCACGCGTTC
TCCGTGCCGC TGAAGATCGC GCTGAACCAG CTCGCGATGC TGCTGCAGCC GTCGGAGATC
ACGCGCGAGA ACCTGCCGCC GCAGATCGTG CGCGACTGGA TCGCGCCGGA CGGCCGCGCG
CTCGTGCAGA TCTCGCCGAA GGTGGTCAAG GGCGCCGATC CGGGCGACGA CGCGATGCTG
CGCCGCTTCG CGAAGGCCGT GAAGGCGGCC GAGCCGGGCG CGATCGGCGG GCCGATCTCG
ATCCTGCATT CGGCGGACAC GATCATCCGC GCGTTCCTGC AGGCGGCCGC GCTGTCCGTC
GTGTCGATCA CGGTGCTGCT GTGGATCACG CTGCGCCGCT TCGGCGACGT GCTGCGCACG
CTCGTGCCGC TCCTCGTGTC GGGCGTCGTG ACGCTCGAGC TGTGCGTGCT GCTCGGGATG
CCGCTCAATT TCGCGAACAT CATCGCGCTG CCGCTGATGC TCGGCGTGGG CGTCGCGTTC
AAGGTGTATT TCGTGATGGC GTGGCGCGCG GGCCAGACGG GCCTGCTGCA GTCGAGCCTC
ACGCACGCGG TGCTGTTCAG CGCCGCGACG ACGGCCACCG CGTTCGGCAG CCTGTGGCTG
TCGCATCATC CGGGCACGGC GAGCATGGGG CGGCTGCTCG CGCTCGCGCT GTCGTGCACG
CTGATCGGCG CCGTCGTGTT CCAGCCCGTG CTGATGGGCA AGCCGCGCAC GAAGCGCGTG
ACGAATCAAT CGCAAGGAAT CGATGAATAA
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| Protein sequence | MPSRTNRRIA RPRCADSFAA ARLPRRRRDK DISPGLPRAR FRPVALCVAL SFPPHFATIR
LDSRASEPSR LRNPRAGILG HFAFSQPPTR RLMLTSVLVR LVAWSVRRPI WVVVLSLVIA
ALSSVYVAHH FKINTDISKL VENDPKWAAL GRAIDDAFPQ RNQTILAVVE APAPEFAGAA
ADALAEGLRR ETDAGRIGQV SEPAGGPLFE HDGLLFLPEQ DVATTTAQLA SARPLINVLA
KDPSIAGLAT TLSTTLGVPL QSGQVKLSGM AKLLSRSAAT VDDVLAGKPA AFSWRALVDA
DAAREPARAF VTVQPVVNYG ALKAGEQASR TIRATAQALK LDERFGAAVR LTGEQPLADE
EFASVQDGAL VNGIATLAIV LVILWIALRS KRMIASVFVT LFVGLVVTAA LGLMMVGSLN
MISVAFMVLF VGLGVDFAIQ YGVKYREERH RDPNLDHALV GAAHAMGMPL TLATAAVAAS
FFSFLPTAYR GVSELGLIAG VGMFVALFTT LTLLPALLKL LAPPGERKPP GFPRLAPVDD
YLDHHRKPIL IGTLAVVIGA LPLLAHLRFD FNPLHLKDPR SESMATLLAL KDSPEASVND
VSLLAPSLAA ANAAAQRLGA LPEVGRTTTL STFIPDAQPQ KLATIAAAAR ELLPALTQPA
AAPVPDAQRV AALKRASNLL EYASEDYPGP GAAAAKHLSE SLAKLAAADA ATRERAEHAF
SVPLKIALNQ LAMLLQPSEI TRENLPPQIV RDWIAPDGRA LVQISPKVVK GADPGDDAML
RRFAKAVKAA EPGAIGGPIS ILHSADTIIR AFLQAAALSV VSITVLLWIT LRRFGDVLRT
LVPLLVSGVV TLELCVLLGM PLNFANIIAL PLMLGVGVAF KVYFVMAWRA GQTGLLQSSL
THAVLFSAAT TATAFGSLWL SHHPGTASMG RLLALALSCT LIGAVVFQPV LMGKPRTKRV
TNQSQGIDE
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