Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1318 |
Symbol | tadC |
ID | 3692179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1629944 |
End bp | 1630903 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637731572 |
Product | type II secretion system protein |
Protein accession | YP_336475 |
Protein GI | 76819357 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACC TCAACGTCAT GCATATCCTG CTGCTGCTCG GCCTGTTCGC GATCGTCGTC GCGGGCGTGA TGGCCACGTG GCTCGCCTTC GCGCCGCGCG GCCTCGCGCG GCGTCTCGAG CAGATCGGCG GCGCCGGCGC GGTCGCGGCG GGCGACGGTC GCGCGCCGCC CGCCGTCTGG ATCGAGAAGC TCGCCGAGAT CTCGCAGCCG ATCTCGAAGC TGTCGCTGCC GAAGTCCGGC TGGGAGAACT CGCCGCTGCG GCTGCGCCTC ATCAATGCCG GATGGCGCTC GCCGGGCGCC GCGCACCTGT ATTTCGCGGC GAAGACCGTG CTCGCGCTCG CGCTGCCCGC GGCGGCGATG CCGTTGCTGA TCGGCACCGC GATCGCGGAC AGCCCGTACT CGGTATCGGC GATGCTCGTG CTGATCGGCG CATTCGGCTT CTATCTGCCG AACGCGATGC TCGCGCGCCG GATCGCGGCG CGGCAGCGGA TGATCGTCGA GGATTTTCCG GACGCGCTCG ATCTGCTGAC CGTGTGCGTG GAAGCGGGGC TCGGCCTCGA CGCGGCGCTG ACGAAGGTCG CCGATGAGCT GCGGCTGCGC AGCCCGGTGG TCGCCGACGA GCTCGGGCTG ATGCTGCTCG AGATGCGCTC CGGCTTCACG AAGGAAACCG CGCTGCGCAA CCTCGCGCTG CGCACGGGGG CCGAGGACGT CGACGCGTTC AGCACGATGC TGATCCAGGC GGACCGCTTC GGCACGAGCA TCGGCGCCTC GCTGCGCGTG CTGTCCGACA CGCTGCGCAC GCAGCGGCGC ATGCGCGCGG AGGAGCGCGC GGCGAAGATC GCGCTGAAGC TGCTGTTTCC GCTGATCTTC TGCATCTTTC CCGCGCTGCT GACGGTGCTG CTCGGGCCCG CGTTCATCCA TATCTACCGG ACGCTGCTGC CGACGATGGC GGGCGGCTGA
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Protein sequence | MENLNVMHIL LLLGLFAIVV AGVMATWLAF APRGLARRLE QIGGAGAVAA GDGRAPPAVW IEKLAEISQP ISKLSLPKSG WENSPLRLRL INAGWRSPGA AHLYFAAKTV LALALPAAAM PLLIGTAIAD SPYSVSAMLV LIGAFGFYLP NAMLARRIAA RQRMIVEDFP DALDLLTVCV EAGLGLDAAL TKVADELRLR SPVVADELGL MLLEMRSGFT KETALRNLAL RTGAEDVDAF STMLIQADRF GTSIGASLRV LSDTLRTQRR MRAEERAAKI ALKLLFPLIF CIFPALLTVL LGPAFIHIYR TLLPTMAGG
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