Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1205 |
Symbol | |
ID | 3694218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 1516466 |
End bp | 1517782 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637731460 |
Product | hypothetical protein |
Protein accession | YP_336363 |
Protein GI | 76817452 |
COG category | [M] Cell wall/membrane/envelope biogenesis [S] Function unknown |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family [TIGR03350] type VI secretion system OmpA/MotB family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.145712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACACTT CTTCCGATTC GTTCTCGGCC GGCTCGGGCG GATTCGTGCC GCCGAATCCG GGCGGCGCGC ACCCGGCCGC CGCGCCGGCG GCGGGTGCGG CCGCGTTTCA GCCGAGGCCG GGCCGCTGGG CGGCGAGCGG CACGAATCCG CTCGTCGCGG CCGCGAACCC GCTGCTGAAC CTCGTGCCGC AGATCCGTTC GACCGTCCAT CATCCGAATC CCGCGTGGCT GCGCGAGCAT CTCGTCGTCG AGATCCGCCA GTTCGAGGAG CGCGCGCAGC AGGCGGGCGT CGCCTCCGAG GCGATCATCG GCGCGCGCTA CTGCCTGTGC ACCGCGCTCG ACGAGGCCGC CGCGCTGACG CCGTGGGGCG GCAGCGTATG GTCGTCGCAT AGCCTGCTCG TGTCGTTCCA CAACGAGACG TGGGGCGGCG AGAAGTTCTT CCATCTGCTT GAGCGGCTGT CGCAGCAGCC GCGCCAGCAT CTCGACCTGC TCGAGCTGCT GTACTTCTGC CTCGCGCTCG GCTTCGAGGG GCGCTACCGC GTGCTCGACA ACGGCCGCGC GCAGCTCGAC GCGGTGCGCC GCCAGCTCGC GCAGACGATC CGCTCGGTGC GCGGCGAATT CGATCCGGCG CTCTCGCCGC ATTGGCGCGA CGTCGTCACG CGCGACGTCA CGCGGCGCTT CACGGTGCCG CTGTGGGTGT GCGTCGCGCT CGCGCTGCTC GTGGGCTTCG GCGTGTTCGC GGGGCTGCGC ATCGCGCTCG CCGGCCATTC GGATCGGCTG TTCGCGTCGA TCGACGCGCT GCACGTGCCG AAGCTGCAGC CGGCGCCGCC CGCGCCGCAT CCGGCGCCCG CGCCGCGCGT CGCGAAGTTC CTCGAGCCGG AGATCGCCGC GGGGCTCGTG AGCGTGCGCG ACGAGGCCGA CCGCAGCGTG ATCGTGCTGC GCGGCGACGG CCTGTTCGGC TCCGGCTCGA CGTCGGTGAT CGATCGCTAC ATGCCGGTGC TCACGCGCGT GGCCGACGCG CTGAACCGGG TGCAGGGCAA CGTGCGCGTG AGCGGCTACA CCGACGACAC GCCGGTGCAC ACCGCGCGCT TCGCATCGAA CTGGGATTTG TCGCGCGAGC GCGCGCAGGC GGTCCGCAGC CTGATCGCCG CGCGGCTCGA CCGCCCCGAG CGGATCACCG CCGAAGGGCG CGGCACGCTC GATCCGGTCG CGCCGAACGA TTCGCCCGCG AACCGCGCGC GCAACCGGCG CGTCGAGATC ACGCTGATGC TCGCGCCCGG CAGCGACGCC GCGCGCGCGA CGAAGGAGGC GCCCTGA
|
Protein sequence | MNTSSDSFSA GSGGFVPPNP GGAHPAAAPA AGAAAFQPRP GRWAASGTNP LVAAANPLLN LVPQIRSTVH HPNPAWLREH LVVEIRQFEE RAQQAGVASE AIIGARYCLC TALDEAAALT PWGGSVWSSH SLLVSFHNET WGGEKFFHLL ERLSQQPRQH LDLLELLYFC LALGFEGRYR VLDNGRAQLD AVRRQLAQTI RSVRGEFDPA LSPHWRDVVT RDVTRRFTVP LWVCVALALL VGFGVFAGLR IALAGHSDRL FASIDALHVP KLQPAPPAPH PAPAPRVAKF LEPEIAAGLV SVRDEADRSV IVLRGDGLFG SGSTSVIDRY MPVLTRVADA LNRVQGNVRV SGYTDDTPVH TARFASNWDL SRERAQAVRS LIAARLDRPE RITAEGRGTL DPVAPNDSPA NRARNRRVEI TLMLAPGSDA ARATKEAP
|
| |