Gene BURPS1710b_A1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1203 
Symbol 
ID3692083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1511923 
End bp1512828 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content74% 
IMG OID637731457 
Producthypothetical protein 
Protein accessionYP_336360 
Protein GI76819515 
COG category[S] Function unknown 
COG ID[COG3913] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03373] type VI secretion-associated protein, BMA_A0400 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.843106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACGA CGCCGGCCTG CGACGGCGAG CCGCCCGCCT GGTACGGCAA GATTCCGGGC 
GCGGGCGACT TCGTCAATCA CCGGCTGTCG CACGAGCTCG CGGGCTGGTG GGAGCGCTGG
CTCCAGCAGG GCATGGCCGC GATGCGCCAG CGCGGCGACG ACGAGCTCGC GCGTTACTAC
ACGGTCGCGC CGGTCTGGAA CTTCCTGATT CCGGCGGGCG CGGGCGCGCA GTGCGTGCAG
CCGGGCTGTC TCGCGCCGAG CTGCGATCGC GTCGGCCGCT ACTACCCGGT GATCGCGACG
CTGCCGATGC GCACCGCCGA TTACTGGAGC GCGCTGCCGG ACGCCGCCGA CGCGTTCTAT
TGGCAGGTCG GCAGCGCGCT GCTCGATGCG ATCCGGCATG CGCGCGCGCC GGTGCAGCTC
GAGCGGGCGC TCGCGAAGGT GCGGCTCGTG CCGGGCGCGG CCGCGGGTTC GGCGTGGTTC
GGCGGCGCGG GGGGCGGGCC CGGTGAGCGC GATTGGCGCG GCGGCGCGCG CGATGCGGCC
CGCGAAAGCG ATGCGGGCTG GGCGATCGGC GGAGCGGGCG ATATCGACGG AGCGGGCGTG
CGCGGTGCGG GCGATGAAGG CGACGGAGGC GATAGAGGCG ATAGAGGCGA GGCGGGCGGT
ATGAGCGGTG TGGGCGCAGC GGACGGCGGC GACGCGCGCA ACGGCGCGCT CGCGCAGCCG
ATGCCGAGCC CGCCCGCGAC GCCCGCTTGG CCGGGACTTT CGCAGTATTT CGATCCGCAC
GGCGCGACGA GCTTCTGGTG GACCAATCGC GCCGACGGCT CGCCGCTGCG CACGCACGCG
CATACCGGCG CGCCGGACAG CCGGCTGTTC CTGCGGCTGT TCGGCGGCGT TCAGCACGGC
GTGTAG
 
Protein sequence
MQTTPACDGE PPAWYGKIPG AGDFVNHRLS HELAGWWERW LQQGMAAMRQ RGDDELARYY 
TVAPVWNFLI PAGAGAQCVQ PGCLAPSCDR VGRYYPVIAT LPMRTADYWS ALPDAADAFY
WQVGSALLDA IRHARAPVQL ERALAKVRLV PGAAAGSAWF GGAGGGPGER DWRGGARDAA
RESDAGWAIG GAGDIDGAGV RGAGDEGDGG DRGDRGEAGG MSGVGAADGG DARNGALAQP
MPSPPATPAW PGLSQYFDPH GATSFWWTNR ADGSPLRTHA HTGAPDSRLF LRLFGGVQHG
V