Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1115 |
Symbol | prnA |
ID | 3692160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1394967 |
End bp | 1396583 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637731369 |
Product | tryptophan halogenase |
Protein accession | YP_336273 |
Protein GI | 76817330 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACC CGATCCAGAA TATCGTCATC GTGGGCGGCG GCACCGCGGG CTGGATGGCC GCCTCGTACC TTGTCCGGGC GCTCCAACAG CAGGCGAACA TTACGCTCAT CGAGTCCGCG GCGATCCCCC GGATCGGCGT GGGCGAGGCG ACCATCCCGA GTCTGCAGAA GGTGTTCTTC GACTTCCTCG GGATTCCGGA GCGGGAGTGG ATGCCCCAGG TGAACGGCGC GTTCAAGGCC GCCATCAAGT TCGTGAACTG GAGGAAGTCT CCCGACCGCT CGCGCGACGA TTACTTCTAC CATTTGTTCG GCAGCGTGCC GAACTGCGAC GGCGTGCCGC TTACCCACTA CTGGCTGCGC AAGCGCGAAC AGGGCTTCCG GCAACCGATG GAGTACGCCT GCTACCCGCA GCCCGAGGCG CTCGACGGCA AGCTGGCACC GTGCCTGCCC GACGGCACCC GCCAGATGTC CCACGCGTGG CACTTCGACG CGCACCTGGT GGCCGACTTC CTGAAGCGCT GGGCCATCGA ACGCGGGGTG AACCGCGTGG TCGACGAGGT CGTGCAGGTT CACCTGAACG AGCGCGGCTA CATCTCCAGC CTGTCCACCC AGGAGGGGCG AACGCTGGAG GCGGACCTGT TCATCGACTG CTCCGGCATG CGAGGGCTCT TGATCAACCA GGCCCTGAAG GAGCCCTTCA TTGACATGTC CGACTACCTG CTGTGCGACA GCGCGGTCGC GAGCGCCGTG CCCAACGACG ACGCGCGCGT GGGGGTCGAG CCGTACACCT CCGCGATCGC CATGAACTCG GGATGGACCT GGAAGATTCC GATGCTGGGC CGGTTCGGCA GCGGCTACGT CTTCTCGAGC AAGTTCACCT CGCGCGACGA GGCCACCGCC GACTTCCTCA ATCTCTGGGG TCTCTCGGAC AAGCAGCCGC TCAACCAGAT CAAGTTCCGG GTCGGGCGCA ACAGGCGGGC GTGGGTCAAC AACTGCGTCG CCATCGGGCT GTCGTCGTGC TTTTTGGAGC CGCTGGAATC GACGGGAATC TATTTCATCT ACGCGGCGCT TTACCAGCTC GTGAAGCACT TCCCCGACAC CTTGTTCGAT CCTCGGTTGA CCGACGCGTT CAACGCCGAG ATCGTCTACA TGTTCGACGA CTGCCGAGAT TTCGTCCAGG CGCACTATTT CACCACGTCG CGCGAAGACA CACCGTTCTG GCGCGCGAAC CGGCACGACC TGCGGCTCTC GGACGCCATC AAAGAGAAGG TTCAGCGCTA CAAGGCGGGG CTGCCGCTGA CCACCACGTC GTTCGACGAT TCCACGTACT ACGAGACGTT CGACTACGAA TTCAAGAACT TCTGGTTGAA CGGAAACTAC TACTGCATCT TTGCCGGCTT GGGGCTACTG CCCGACCGAT CGCTGCCGCT CTTGCGGCAC CGATCGGAGT CGATCGACAA GGCCGAGACG ATGTTCGCCC GCATCCGGCG CGAGGCCGAG CGCCTGCGAA CGAGCCTGCC GACGAACTAC GACTACCTGC GCTCGCTGCG TGAGGGCGAC GTGGGGCTGT CTCGCAGCCG GCCCGGGCCG ACGCTCGCGG CACCGGAAAT TCTGTAG
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Protein sequence | MSNPIQNIVI VGGGTAGWMA ASYLVRALQQ QANITLIESA AIPRIGVGEA TIPSLQKVFF DFLGIPEREW MPQVNGAFKA AIKFVNWRKS PDRSRDDYFY HLFGSVPNCD GVPLTHYWLR KREQGFRQPM EYACYPQPEA LDGKLAPCLP DGTRQMSHAW HFDAHLVADF LKRWAIERGV NRVVDEVVQV HLNERGYISS LSTQEGRTLE ADLFIDCSGM RGLLINQALK EPFIDMSDYL LCDSAVASAV PNDDARVGVE PYTSAIAMNS GWTWKIPMLG RFGSGYVFSS KFTSRDEATA DFLNLWGLSD KQPLNQIKFR VGRNRRAWVN NCVAIGLSSC FLEPLESTGI YFIYAALYQL VKHFPDTLFD PRLTDAFNAE IVYMFDDCRD FVQAHYFTTS REDTPFWRAN RHDLRLSDAI KEKVQRYKAG LPLTTTSFDD STYYETFDYE FKNFWLNGNY YCIFAGLGLL PDRSLPLLRH RSESIDKAET MFARIRREAE RLRTSLPTNY DYLRSLREGD VGLSRSRPGP TLAAPEIL
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