| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0542 |
|---|
| Symbol | |
|---|
| ID | 3693666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 732609 |
|---|
| End bp | 735251 |
|---|
| Gene Length | 2643 bp |
|---|
| Protein Length | 880 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637730796 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_335701 |
|---|
| Protein GI | 76819579 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG TCAAACCCGA AACGCTCGCG CTGATGTGCC GCACGCTGCG CATCGAACGC
GCCGACCGGC TGTCGATCGG CGCGCTCGCC TGCTTCGCGC TGCGCGCGCA CGCGCCCGAC
GGCCCCGGCG ATCTCGCGCC GGAGGCCACG CTCTGGCAGA TCGCCCAGCA ATGGCTCGGC
GCCCATGCGC CGCTCGACGA GGGCTGGCCG AAGCCGGCGG GCGAATTTCT CGTCTACGGC
GACGCATGCG CGCCGGCGGG CCGCGAGCAC GCGGGCGGCG CGCCGTTCGC GGTGCGCGCG
CGCATCGGCG CGGCATGCAA GGCGCGGCTC GTCGATGCGC GCGACCCCGC CGAGCGGGTA
CTCGCCGATT TTCGCGCGCT GCCGCCGTCG CATCCGCAGC GCGTGCGCGA TCTCGGGCCG
TTCGACGCGC GCTGGCTGGC CGAGCGGTGG CCTCACCTGC CTTCGGGCAC GCGCGCCGAG
CATTTCCATA CCGCACCGCG CGATCAGCGG ATCGCCGGGT TCTGGCGCGG CGACGAGGAC
ATCGAGCTCG TCAACCTGCA CGCGCAGCAT CCGATCGTCG CCGGCGCGTT GCCGCGCGTG
CGGGCGCGCT GCTTCGTCGA GCGCTCGGCC GGCGGCGCGA CGCGCGTCGA CGCGTGCCCG
ATGCGCGCGG AAACCGTCTG GCTGTTCCCC GGCGCGGCAT GCGGCATCGT CCTGTACCGC
GGGCTCGCCA CGATCGACGA CGAAGACGGC GACGACGTCT TGCGCGTGAT CGCCGGCTGG
GAAGATGCCG CCGCGCCGCC GTTGCCCGCC GACGCTTATC TCGGCCGGCC GGCCTCCGGG
GGCGCCGGCT CGCGCCCGAC GCCCGCGCCC GACGCCGCGC CCGTGGCGTC TGTGGTGCCC
GCCGCGCTCA CCGCCGAAGA AGCGCACGCC GACGAACATG CGCCGGGCGG ATCGGCATCG
GCCTCGCAGG CGCACTCGCC GGCAGCGCCC GAGTTCCCCG AAGCACCGCA CGCGCCGGAT
CTGTCCGCGC TCGAACGGGA AGCGGCGGCG CTTGCCGAGC AAACCGACGC GTTGCTCGCC
GGGCTGGGCA TCACCGAAGC GGACATCGCG CGCTTGCTGC CCGCGCGCGA CGCCCCCGCC
GAGCTGAATC TGGATCAGCT CGCCACGCTC GCGGCCGAAC TCGACGCGCA AACCGCACAG
TGGCAGGCGC AGCAAGCGGC GGCGGCCGTC GAGCGCGGCG ACGCGGCCTC GGCGACGCCC
GCCGCGCCGG CCACGCCGGA TGCCGAGGCC GCGCACGAAG CGTCGCTGGC CGACCTGCTT
CGGCAGGCCG ACGCGCAAAT GCGCGCCCTC GTCGAGCAGC ACGGCCTGTC GCGCGCACGA
ATGGAGGCGG CCGCGCGAAC CCTGCCGGAG CTCGCGCCCC TCGCGGGCTC GCTCGATGCC
CTCGACGCAC TCGATGCGCC GCTCGACGTC GATGCCTTGA CGGCAGGGCT CGCCGCCGCC
GGCGGCGACG CGGCGGCCGA ACCGGATACG CCGGCCGAAC CGAGCCCGCC GGCGCCCGCG
AACGAATTCG CCGCCGCCGT GCCCGCCCCC GCATCGTCCA CCGCCGCGCC GCCGGTGGAC
GATGCGCCGC CAGGGCCGCT CACGCGCGAG CAAGTAATCG AGCGCCACGC GCGCGGGCTC
GGCTTCGCCG GCCTCGACCT GAGCGGCCTG GACCTGTCGT CGGCCGCGCT CGAGCGCGCG
GACTTTCGCC GCGCACGCCT CGAACGCACC CGCTTCGCGG GCTGCCGGCT CGCCGGCGCA
TCGTTCGAGC GCGCGCTGCT GTCGCACGCC GATTTCTCGA ACGCGGACCT GCGCGACGCG
GTCTTCGCCG GCGCCTCCGC GCCCGGCGCA TCGTGGCGCG GCGCCGTGCT CGAGCGCGCG
CGCCTCGAGC ACGGCGACTT CAGCGGCGGC GACTTCGCGC AAGCGTCGCT CGCCGACAGC
CATTGCGCGC ACGCGCAGTT CGACGCGAGC GCGATGACGG CGCTCGTCGC GGCGCGCATC
GACGGCACGC ACGCGAGCTT CGCCGGCTGC ACGCTCGACG CCGCCGATTT CACGTCGGCG
CGCCTGCCGC GCGCGAATTT CCAGCATGCG ACGCTCGCGG ACGCGGCGCT CGCCTGCACG
CACTGCGACG GCGCCGAATG GTACGGCGCG CAGGCGCCGC GTGTCCGGCT TCGCGCGGCG
TCGCTGCGCG GCTCGCGCGC GGACGCGTCG ACATCGTTCC GGCAAGCCGA TCTGAGCAGC
GCCGCGCTCG ACGACGCGAA CTGGGACGGC GTCGACCTGC GCGGCACGAA CCTGCACGAG
GCGACGCTCG ACGGCGCGAG CCTCGCGCGC GCGAACGCGA GCGGCGCGCA ACTGACGCGC
GCGCGCGCAC GGCGCGCGGA TCTGACCCAG GCCGACCTCA CGCACGCGGA TGCGCGCTGC
TCGAACCTGC ACGGCGCATC GCTGCGCCGC GCACGGCTCG GCGGCACGCA ACTGCAATCG
AGCAACCTGT ACGGCGCCGA CTGCTACGGC ACCGCGCTCG CCCGGCCGCA GCTCGACGGC
GCGAATATCG AGCGCACGCT CCTCGCCGTG CCGGGCCGCC CCGAACTCGC CGCCTCCCGC
TGA
|
|---|
| Protein sequence | MKIVKPETLA LMCRTLRIER ADRLSIGALA CFALRAHAPD GPGDLAPEAT LWQIAQQWLG
AHAPLDEGWP KPAGEFLVYG DACAPAGREH AGGAPFAVRA RIGAACKARL VDARDPAERV
LADFRALPPS HPQRVRDLGP FDARWLAERW PHLPSGTRAE HFHTAPRDQR IAGFWRGDED
IELVNLHAQH PIVAGALPRV RARCFVERSA GGATRVDACP MRAETVWLFP GAACGIVLYR
GLATIDDEDG DDVLRVIAGW EDAAAPPLPA DAYLGRPASG GAGSRPTPAP DAAPVASVVP
AALTAEEAHA DEHAPGGSAS ASQAHSPAAP EFPEAPHAPD LSALEREAAA LAEQTDALLA
GLGITEADIA RLLPARDAPA ELNLDQLATL AAELDAQTAQ WQAQQAAAAV ERGDAASATP
AAPATPDAEA AHEASLADLL RQADAQMRAL VEQHGLSRAR MEAAARTLPE LAPLAGSLDA
LDALDAPLDV DALTAGLAAA GGDAAAEPDT PAEPSPPAPA NEFAAAVPAP ASSTAAPPVD
DAPPGPLTRE QVIERHARGL GFAGLDLSGL DLSSAALERA DFRRARLERT RFAGCRLAGA
SFERALLSHA DFSNADLRDA VFAGASAPGA SWRGAVLERA RLEHGDFSGG DFAQASLADS
HCAHAQFDAS AMTALVAARI DGTHASFAGC TLDAADFTSA RLPRANFQHA TLADAALACT
HCDGAEWYGA QAPRVRLRAA SLRGSRADAS TSFRQADLSS AALDDANWDG VDLRGTNLHE
ATLDGASLAR ANASGAQLTR ARARRADLTQ ADLTHADARC SNLHGASLRR ARLGGTQLQS
SNLYGADCYG TALARPQLDG ANIERTLLAV PGRPELAASR
|
|---|
| |