Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0540 |
Symbol | |
ID | 3692170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 726405 |
End bp | 729533 |
Gene Length | 3129 bp |
Protein Length | 1042 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637730794 |
Product | ATP-dependent Clp protease, ATP-binding subunit ClpB |
Protein accession | YP_335699 |
Protein GI | 76819348 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTGG TTGACCTGAA ACCGTTGATC GAACAGCTCA ACCCCTATTG CCGGAACGCG CTCGAAAGCG CCGTCGGCGC GTGCGTCGCG CGCCGGCACG ACGACGTCGC CGTCGAGCAC CTGCTCGCGC GGCTGTGCGA CGAACCGTCG GCCGACGTCG CGCTGTTGCT GCGCGCGTGC GGCGCGGACG CGGCGCGCCT GCGCCGGCAG GCCGACGCCG CGCTCGACGC GCGCCCGGCG GGCGACGGCG GCCGCCCCGC GTTCGCGCCG TCGCTGCTCG CGCTGTTGCA GGACGCGTGG CTGATCGCGT CGCTCGAGCT CGGCGACACG CACATCCGCT CGGCGGCCGT GCTCGCCGCC GCGGTCGCCC GCGCGGCGCG GCAGCCGTCG CCCGGCGGCG ACGACGTGCT GCAGTCGCTG CGCAAGGACG CGCTCGTCGC GCGCTTTGCG AGCGGCGCGT GCGCGCGATC GATCGAATCG CGCGCGTCCG GCGCGCTCGA CGCCGCGCCG GGCGAGGCGA GCGACACGCG CGACGCATCG AGCGCGATCG CCCGCTACTG CGAGGACTTC ACCGCGAAAG CGCGCGCCGG CGGGATCGAT CCGGTCTTCG GTCGCGACGC GGAAATCCGC CAGATCGTCG ACATCCTCGC GCGGCGGCGC AAGAACAATC CGGTGTGCGT CGGCGAGCCG GGCGTGGGCA AGACGGCCGT CGTCGAAGGG CTCGCGCTGC GGATCGCCGA AGGCGACGTG CCGGCGACGC TGCGCGGCGC GACGCTGCTC GGCCTCGACC TCGGCATGCT GCAGGCGGGC GCGAGCGTGA AGGGCGAATT CGAGCAGCGG CTCAAGCGCG TGATCGCCGA GATCCGCGCG TCGCAAACGC CCGTCGTGCT GTTCATCGAC GAAGCGCACA CGCTGATCGG CGCGGGCGGC GCGGCGGGCG CGTCCGACGC GGCGAACCTG CTGAAGCCCG CGCTCGCGCG CGGCGAGCTG CGCACGATCG CAGCCACCAC GTGGAGCGAA TACAAGAAGT ATTTCGAGAA GGACGCGGCG CTCGCGCGGC GCTTCCAGCC GGTGAAGCTC GACAGCCCGG ACGTCGCGAC GTCGGTGATG ATCCTGCGCG GGCTGAAGGA GCGCTATCAG GACGCGCACG GCGTGACGAT CCGCGACGAC GCGCTCGTGG CCGCGGCCGA GCTGTCGGCG CGCTACATCA CCGGCCGGCA GTTGCCGGAC AAGGCGATCG ACCTGCTCGA CACCGCGTGC GCGCGCGTGA AGGTGCGCCA GCAGACCAAG CCCGCCGCGC TGGAGGACGC GCAGCGCGCG ATCCAGGCGC TCGAGCGCGA GCGGCGCGCG CTGCGCGACG AATTGGCCGA GCGCTGCGCG CCGGATACGC CGCGCGTCGC CGACATCGAT CGCGAGCTCG CCGCGCTGTC CGCGCGCGCC GGCGCGCTGC GCGACGCGTG GGCGGCGCAG CGCGACGCCG CGCAGGCGCT CGTCGACGCA CGCCGCGCGT GCCGGGCGGC GGCGGATGCA ACGGCTGCAA CGGATGCGGC TGGAACGACC GGAACGGCCC ATGCCGGCGA GCTCGCCGAT AGTGCCGACG TTTCCGATAT CGCCGATGTC ACCAAGATGG CCGATGCGGC CGACGCCGCC CCTGCCGATG CCGAAACCGG CTCGAACGCC CGCGACGCCG ACGCACGCAT GCCCGCCGGG ACGTGCGCGC GCATCGCCCC GAACCCTGAT GCGCGGGCGT GGCCCCCTCT GCGCGCGCCG CACGCCGACG CGCGCGAGCG CGCGGCTCGT GCGCTCGCCG AAGCGACGCG CCGCTTCGAG CACGCGCAGC GCGACACGCC GCTCGTGCGA ATCGACGTCG ACCCGGACGC GATCGCCGAC GTCGTGGCCG ACTGGACCGG CATCGCGGCC GGCAAGCTGC GCCGCGATCG CGCGAACGTG ATGCTGCGGC TCGCCGATAC GCTGCGCCGC CGCATCCGCG GCCAGGATCA CGCGATCGAA CAGATCTCCG AAGCCGTGAA GGCGGGCGCG GCCGGCGTCC ACGATCCGCG CCGCCCGCTC GGCGTGTTCC TGCTCGCGGG GCCGTCGGGC ACCGGCAAGA CCGAGACCGC GCTCGCGGTC GCCGATGCGC TGTTCGGCGA CGAGCGCTCG ATCGTCGTCG TCAACATGAG CGAATTCCAG GAGCGGCACG ACGTGAGCCG CCTGATCGGC TCGCCGCCGG GCTACGTCGG CTACGGCGAG GGCGGGATGC TGACCGAGGC GGTGCGCCAG CGGCCCTATT CGGTCGTGCT GCTAGACGAA GTCGAGAAGG CGCACCCCGA CGTGCTGAAC CTGTTCTACC AGGTGTTCGA CAAGGGTTCG CTGTCCGACG GCGAAGGCAA GGAGGTCGAC TTCGCGAACA CGGTGATCTT CCTCACGTCG AATCTCGGCG CGGACATCAT CGCCGACATC GCCGCGCGCG GCGCGCGGCC CGATCCGGAC GCGATGCGCG CGGCGGTGCG CCCGGCGCTG TCGCGCCATT TCAAGCCGGC GCTGCTCGCG CGGATGACCG AGATTCCGTA TGCGCCGCTC GCGCCCGATA CGCTCGCCGA CATCGCGCGG CTGAAGCTCG AGCGCATCGC GACGCGCGTC GCCGCGCAGC ACGCGACGCG CATCGTCTAC GACGACGCCG TCGTCGCGCA CGTCGCCGCG CGCTGCACCG AAGTCGAATC GGGCGCGCGC AACGTCGATT TCATCCTGCA GCGCCACGTG CTGCCCGCGC TCGCGCAGCA CGTGCTCGTG TGCGCGGGCA ACGCGGCGCC GATGCCTGCG ATTCGCGTCG CCATCGACGC CGGCGGCCGC TTCGTCGTCT CGAACGACGC GCCGGCCGAC TCCGATGCAT GGGACCGGAG CGATGCGTCC GATGCGTCCG ATGCGTCTGA TGCGATCGAT GCGATCGATG CGATCGATGC GGTCGATGCG GTCGATGCGG TCGATGCGGT CGATGCGGTC GATGCGGTCG ATGCGGTCGA TGCGGTCGAT GCACCCAACG CACCCAACGC ACCCAACGCA CCCAACGCAC CCAACGCACC CAACGCACCC AACGCACCCA ACGCACCCAA CGCACCCAAC GCACGCTGA
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Protein sequence | MLLVDLKPLI EQLNPYCRNA LESAVGACVA RRHDDVAVEH LLARLCDEPS ADVALLLRAC GADAARLRRQ ADAALDARPA GDGGRPAFAP SLLALLQDAW LIASLELGDT HIRSAAVLAA AVARAARQPS PGGDDVLQSL RKDALVARFA SGACARSIES RASGALDAAP GEASDTRDAS SAIARYCEDF TAKARAGGID PVFGRDAEIR QIVDILARRR KNNPVCVGEP GVGKTAVVEG LALRIAEGDV PATLRGATLL GLDLGMLQAG ASVKGEFEQR LKRVIAEIRA SQTPVVLFID EAHTLIGAGG AAGASDAANL LKPALARGEL RTIAATTWSE YKKYFEKDAA LARRFQPVKL DSPDVATSVM ILRGLKERYQ DAHGVTIRDD ALVAAAELSA RYITGRQLPD KAIDLLDTAC ARVKVRQQTK PAALEDAQRA IQALERERRA LRDELAERCA PDTPRVADID RELAALSARA GALRDAWAAQ RDAAQALVDA RRACRAAADA TAATDAAGTT GTAHAGELAD SADVSDIADV TKMADAADAA PADAETGSNA RDADARMPAG TCARIAPNPD ARAWPPLRAP HADARERAAR ALAEATRRFE HAQRDTPLVR IDVDPDAIAD VVADWTGIAA GKLRRDRANV MLRLADTLRR RIRGQDHAIE QISEAVKAGA AGVHDPRRPL GVFLLAGPSG TGKTETALAV ADALFGDERS IVVVNMSEFQ ERHDVSRLIG SPPGYVGYGE GGMLTEAVRQ RPYSVVLLDE VEKAHPDVLN LFYQVFDKGS LSDGEGKEVD FANTVIFLTS NLGADIIADI AARGARPDPD AMRAAVRPAL SRHFKPALLA RMTEIPYAPL APDTLADIAR LKLERIATRV AAQHATRIVY DDAVVAHVAA RCTEVESGAR NVDFILQRHV LPALAQHVLV CAGNAAPMPA IRVAIDAGGR FVVSNDAPAD SDAWDRSDAS DASDASDAID AIDAIDAVDA VDAVDAVDAV DAVDAVDAVD APNAPNAPNA PNAPNAPNAP NAPNAPNAPN AR
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