| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0164 |
|---|
| Symbol | toxR |
|---|
| ID | 3691965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 232157 |
|---|
| End bp | 232612 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637730418 |
|---|
| Product | transcriptional regulatory component of sensory transduction system |
|---|
| Protein accession | YP_335323 |
|---|
| Protein GI | 76819262 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3710] DNA-binding winged-HTH domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00945737 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGCTT CAGGCCATGT GAGAGAACCC ATGATTACCA GGAATGAATC AACCGGGCGC
ACCAATGACA CCCCACCCTC CTTAAGCAAC ATAACGATAA GTGAATTATT TAATTATTCT
TATAAAAGAA GATTTTTGAT CGCCAACTCA ATAGATTTTG ATCCAAAAAC AGGAAAACTT
CACATTGCAT CCTCCCCGGA CGCCATTCCG CTTACATCAT TATCAGCTCG GTTACTGTCC
ATATTTTGCA CATTTCCAGG CAACATTATT GACAGAGATA TCATTATGGA AATATTATGG
GCAAGCCGTG GAATGATTGT CACCGACAAC ACATTAACAA AAGCCATTTC TCACTTAAGA
ATAAAGCTAA ATGTCGCAAA TAAAGACATT AAATTTATAA GCACATTGAA TAGAATCGGG
TACATATTTG TTGCGGATGT AACGCCAATC GATTGA
|
|---|
| Protein sequence | MEASGHVREP MITRNESTGR TNDTPPSLSN ITISELFNYS YKRRFLIANS IDFDPKTGKL
HIASSPDAIP LTSLSARLLS IFCTFPGNII DRDIIMEILW ASRGMIVTDN TLTKAISHLR
IKLNVANKDI KFISTLNRIG YIFVADVTPI D
|
|---|
| |