| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0163 |
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| Symbol | tcdA4 |
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| ID | 3694566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 222719 |
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| End bp | 230272 |
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| Gene Length | 7554 bp |
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| Protein Length | 2517 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637730417 |
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| Product | TcdA4 |
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| Protein accession | YP_335322 |
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| Protein GI | 76818657 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.8835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATACCC AGACGTTGTC TCGGCTCCAA TCGTCAATCG AACCGCTTGG TATCAAGACA
CTCATTGAGA TTGCGCTGTT TTCGTTCGAT GAGTTTCGGA ATAAGGTGAG GGACGTGCTA
AGTTGGCACG AAACGCGGGT GATGTACCGG GCAGCGCAGA GATCCCTCAA CGAAAGCAAG
CTATACGAAG CCCTGTTGTT GTCGCGGTCG AATCCGCAGT TGTCGCAAGC AGTGGGTTTG
GCGATTGCGC CGCCGCGTGT CCAGTTGCAC GACTACGAAA GCATGCTCGG GCAACGCGCG
AGCCAGTATG TCGCGCCAGG CTCGGTGGCT TCCATGTTCT CGCCGGCCGC CTATCTGACC
GAAATGTATC GGGAAGCGCG GGCACTGCAC TACGCGAACT TCCCCTACCA TCTGGACGTC
CGTCGCCCCG ACCTTGCCGC GCTGGGGCTA AGCCAGCGCA ACTTGGATGA ATCGGTGTCG
ACGCTGGATC TGTCCAACGA GATACTGCAG GCTGCCATCC GTGCACACGA CACGAGTTTG
ACCGGCGACG AGTCGGTCCC GCAACGGCTG GCGACTTGGC GCGCGCAGGG CGCGACGCCG
TTTAACGAAG CGTTCGAGCA GGTGCGGCGA GCATTGTTGA CTCTGGACCC TGAGGGAAAA
CACGAGGGAA CGGCGCCGGA CGTTGCAGGC CTGATGTCGG CAGCATCGCG GCTGGGCATC
CGTGCCGGGA TCAGCCCGGA ACTCCATGCG ATTTTGACCG AGGCGGTTCC GGACGAGTCT
GCGGATCAGG AGTTTGAGCG CAACTTCGGA AATGTCTCCG TGAACGAACT ACTGAACGTT
CGTGCGCTGG CCCAGTACTA TGACATCTCG GATGATCTCT GTTCTGAGTT CATCGAAAAC
TATGCGCTCA AAGGCTATCG CCAAAACCGC ACGAACACGC TCTCTCGGTT GGCGTATCCG
AAAATGGATC AGGCCGGCAA TCTGTCCCTG TTGCATGTGA CTCGTTTCTA TGCATCAGCG
GAATCATCAT TCGTACATTA CATCGAACTG ATACCCGCCC GATACAGTCA CAACTTTGAG
TTGCTGCGTT TCAGCTTCGC CAGCGTGCCC TCAACGGCAG CCAAGTTAGA GGTTTTCACC
AGTGTGAATG CAACGAGGTG GCAATCGATC TTTGTCGATG AACAGTTCAA CGACGGAAAG
TCGGATCAGG AGTATCGGTT GCCCATCAAC ATAGAAATAC CAGGAGATTG GCAGAACATA
CAAGTGTCAC TAAATTGTTA CGATTCCAGC GGGAGGCTTC TGATCACTCC GAATGCAGGT
TTCATCCCTG GCCGCAATCT AGACAAGAAC GTTCTGCTCG AGATCAACAA GTCCATCCGG
GCGCACAAAG CCACCGGGCT GGCGCCTGCC GCGGTCGATG CGGTCGCCGC GAGCGTGCAC
GCTGACTGGA CCATGGACGA GGCGGCGGTG CGCCGCATGC TCGAGATGCA GTCGTCCATG
CAACGAAATG CGATCGACTA TGATCGGGCG CTGTGCCTGT GCAATGGCGA CATTTCACGG
CTTCGATTCG GCGGGCAGTC CGGCCAGTTC GACCGATTAT TCAATAGCCC GCCGCTGAAC
GGTTATGTGT TCGGCACGGG AGGTCCCCGG ATTGACTTGA AGCCGGACAG TTCGGGCGAC
GATCTGCGCA AAGCAGTGTT GAAACGCGCG TTTCAGGTCG ACGATGTGGC GTTGTACCGC
TTGTTGCTTG TGGCCGATCC CGGGAACAAG GACGGCACGA TCCCCAACGA CCTTGCTCAT
TTGTCGGCCC TGTATCGTGC GCATCTGCTC GCTGATGTGC ATCGGCTGAG CGTGGACGAC
CTGGCGCTGC TGATGGCCGG ACTCGGGGAA GCTGCGACCG GGCTGATCGG GATCAGTGAT
GAAGCGTTGT TCGGTCTGCT GCACCGGCTG CGGACGGCAG TGCGCTGGTT GAACGACATG
AAGTGGAACC CATACGACCT GTTCGTGATG ACCACGACGG TCTATGCCGA TACGTTGACG
CCGGACATTG GGAACCTGCT GGAGGCACTC AACAACGGGC TGCCGGATGC CGACCTGAAC
GACGGGGAGT TGATCGAGGC GATGGCGCCC TATGTCGCAG CATCATTGCG TCTGACCTCG
AACGAAGTGG CGTGCGCCGT GCTGCTCTGG TTGGATCAGC TGCAACCCAA TGGCATGGGC
GTTGACGCGT TTTGGGCGGC GGTGGCAAAC CACGCCCCGC CGCCGGCCGC TGCCATTCAG
TTTTGCCACG CGCTGGCGCA ACTAGCGCTC GTGTATCAGG CTACCGGTCT CGATGCGAAC
TCGTTCCGCC GGCTGGTCGA GCAGCCGGAC AGCCTCGTCA CGCTGCCCGA GGGCGCGACC
GTGGCCGGCC ATGACGCGCG CACCCTGATG CAGCTCACCG CCTATGCGGA ATGGGTCGGG
CGACTGGCGG GCAACGCTGC TACGGTCTTG AGCGCATTCG AAGTCGACGC GCTCACCCCC
GCCCAGTTGG CCCAGGCCAT GGCACTGGAC GAGCAGTTGC TGCGGCAGGC GGGCAAACAG
GCGGCGCAGC ACGAGCAGAT CGAGGACTCG GAACTCCTGC ATACCTGGCC GGAAATCGAC
GTCGTGATGC AGTGGATCAA TCTGGCGAAC GGACTGGGTG TGGCGCCGAA GGGCGTGGCC
GACTGGCTGG CACTGGATTA CATGCGGCCG GCCGATGCGG CGGTGCTGGC GTATCCGGAG
TGGGAACGGG TGGCCACTTC ATTCGTGGCC GCGTTGCCCG CCGACCAGGC CGATACGGTT
GCGGGCACGG TGGCGGAATC GCTCGCCGCG ACGCTCGCGG GTTATTACCT GGCGGAAGTC
GCCGATCCGA CGCTGAATTT ACGCACCCGG GACGACCTGT ACAGCTACTT GCTGATCGAC
AATCAGGTGA GCCCCCAGAT CAAGACGACC CGGATCGCCG AGGCGATGGC CAGCATCCAG
CTGTATGTCC ACCGTGCGTT GAGCCGGAGC GAACCCCAAG TCCTCACCGC GGTGTCGTCC
CGCCAGTACT TTGCCGACTG GGAGACGTAC AACAAGCGCT ACAGCACCTG GGCAGGCGTT
TCACAGTTGG TGTACTACCC GGAGAATTAC ATCGATCCGA CGCTGCGGAT CGGGCAGACG
GGTATGATGA ATAATTTGCT GCAGTCGGTG AATCAGGCAT ACCTGACAGC GGATACGGTC
GATGATGCCT TCAACATCTA CCTGACGGCG TTCGAGCAGG TGGCAAATCT GGACGTGGTC
AGCGCGTATC ACGACAATGT GAACGTGGAC CAGGGGCTCA CGTACTTTGT GGGCAGTAAC
CGCAGCAGCG AGGCCGAGTT CAGCTGGCGG AGCGTCGATC ACAACAAGTG CCATGACGGG
CAGTTTGCGG CCAATGCGTG GAGCGAGTGG CGGGCGATCA ACTGTGCGTT GAAACCATAT
CATGGTGTGA TACGTCCGGT CGTACGCAAT ACGCGTCTGC ACCTGGTGTG GCTGGAGCGG
ACCGAGCGGG CCGAGGCGAA AGCCGAAGGG GAGGACGTTT TCAACGAAGT GACGTATCAA
TATTGGCTGA AGCTGGCGTA TTTGCGTTAC GACGGGACGT GGTCGGCGCC GCTCACATAC
GAGGTGACTA CCACGCTGGC CAAACTGCAA CTGGCCAATG ACGAGGCGCC GGGCCTGTAT
TGCGCGGAAA GCCCCACCCA CCAGTCCTTG CTGGTGCTGT TCTACAAGGT CCAGGCTGCC
GCGGCCGCGG CGCCAGCGGC GGGCCTGGTC ATCTTGCAGG ATCTGTCCTC AAGGGAACTG
ACATCGGAGC AGAGCCGATA CTATCGCGAC AACGTGCATG CCCAGTTCGA TACGCCGAAT
CGCCGGCGCG TCAATAATCG TTACGGCGAG CACTATCAAA TTCCGAATTC GGTAACGGTC
AATTCTGGAT TCGAATGGGG TGCACATCAG ATTTCGCGTG CATTTGGAGG CAGAATCGTT
GGCATCATGT ATGAGGCGTC GCTGGAGAAA CTATATATCC AATGCAACAT TTCGGTGGAC
GTGGTATTTG ATGTGACCAA AGATGTTAAT GGCATGGCAT ATTTACATCT TTATACTCTT
CAGCGGCGCG CAACACCCGG GGCAATGGTT ACTCTTTTTA ACGAGGCTGA CCCGTGTTTT
GGAATGATTT GGCAGCACGG CGCAAGCCAT CTCAGCCTTA CTTCTCACGA AGATTATGTT
TTTCCGCCTT CTGATTACTA TCATGGGGAG CCGCGAATTG GTGTTGGTAT TGGGGCAAGC
TATGGGGTAG CCTTTGATAA TTACATGGGG GCTGGTGGCT ACGATATTTT TTCGGGGGGC
GATGTGAAGC GCTTCTCCAG CATTCAAGTA TTCAAAGAGG TGATGGGGCA ATATACGATT
TATAAGAATT CGGCTATTTT AAATACAATT GATTTGAATA CGTCGCTTCC ACTCGATAAA
GTCGACGTTA TTGTGGATGA GGGGGAGGGC GTGAAGTTCC GCGCAATTGA CTACGTTAAG
CATGCTCCCG AGCCGAGCCT GCGCAGAATG AGTTTTCCAT TCGAGAAGCT AACCATTGAC
GCCAGTCGTC TGGTTTATGT CGACAACAAA GCAAGTGTCG ATATTTCCTG CGAAGCGCGG
TTTGCCGACG GTCAACTGGC AGGCAGAGAA TTTTTCTCCA TTCCGGTAGT CAGGGTTGTC
GAAGGGACTT CAAATGTGCT GAGCTTGCAC CGTGAGGACA GCGGCGCCCA GTACATGCAG
TGGGGGGCCT ACCGGGTACG CCTGAACACC CTGTTCGCTC GTCAGCTGAT TGAACGCGCG
GCCGTGGGAC TCGATAGAAT CCTGACCCTC GGTACCCAGT ATCTGGCCGA GCCCCCGCTC
GGCGAGGGCG GCTATGTCAA GGTGACGCTG CCAGCCTATA ACCCGACGTT GCATGGCTCG
ACACGGGGTG TACGGCTCGT CCTGCGAAGC GGCACCGCTT CGGCGTCAAC GGAATTTGCG
TTCTTAAATG CATCGCTGAC AGATATCGTC CAGCACCACA TGCTTTTCGT GCCGGTCTCG
CAAGTGCGCG CAGGCGATGC GCTGGATTTC CCGGCGGATT TGAGCACGGG CCTCGGCGTG
GTACTCGCGT GTCAGCGTGG CCAATTCAAG GCGGGGCAAC TCCGATTCGA TCCGGCGACC
CTCAAGCCCA CCGACTTTGT CAAGGACTCG GGCTGGACCA GCGGTCGGGA TGCCGACGTC
CAGATTGATC CAATCTATAT CGAACCGATG GACTTTGGCG GCGCGAACGC GCTGTACTTC
TGGGAGCTGT TCTACTACAC CCCGATGCTG GTCGCGCAGC GGTTGCTGGT GGAGCAGCGC
TTCGATGAAG CACAGCGCTG GCTGCAGTAT GTATGGAATC CGGCCGGCTA CGTGGTAGAA
GGGCTGCTGC AGGACTATCA GTGGAATGTC CGGCCATTGG AAGAAGACCT CGGCTGGAAT
GCCGAGTCGC TAGACAGCAC GGATCCGGAT GCGATCGCGC AAGTTGACCC GATGCACTAC
AAGGTCGCGA CCTTCATGCG CTGGCTGGAT CTGCTGCTGG CCCGTGGCGA CCGCGCCTAT
CGCCAGCTTG AGCGCGACAC GCTGAGCGAG GCGAAGATGT GGTATGTGCA GGCCTTGCAG
CTTCTGGGCG AACAACCGTA TCTGCCGCGC GCTGCGGAAT GGTCCGAGCC GTCCCTCGCG
GCGGCCGCTG ACGAGACGGC GCAATTGGCT CGTCTGCAGG CGCTAGAAGC CTTATCGGCC
GGCGGACAGC CCGCCCCGCT GACCGCCAAT TCGCTGACGG CGCTGTTCCT GCCGCAGGCC
AACGACGTGC TGCAGGGCTA TTGGCGAACG CTTGAACAGC GGCTCTACAA TCTGCGCCAC
AACCTTTCGA TCGACGGGCA GCCGCTCTCG CTCGCGCCAT ATGCCACCCC CGCCAATCCG
AAGGCTCTGC AGAGTGCGGC CGTGTCGGCG TCGTCCGGAG GCAAGCCGCT CCCGCCGAGC
TACCTGACGT TGTGGCGATT CCCGCAGATG CTGGAGAACG CCAAGAGCAC GGTGTCGCAG
TTGATGCAGT TTGGTAGCAA CCTGCAGGGT ATCATCGAGC GTCAGGACGC GGAGGCACTC
AGTGAGCTGC TGCAAAACCA GGCCAAGGAC TTGGTACTGA TCTCTCTGAG CGAGCAGGAC
CAGAGGCTGG CGGAAGTGGA CTCGAGTATT CTCGCTTTGA CTGAGGCAAT GGAGGCAGCG
ACACAGCGGC GGAACCACTA CACGAAGCTG TATGACGAAA ACATCAATAG TGGCGAGCAG
GCGGTGCTGG GTTTGCGAGC GTCGTCATCG GCCATCACCG CTACCGCGAC AGCCCTGCAA
ATGGCGGGGG CGTTGGCCGA AATGGTCCCG AACATCTTTG GCTTTTCGAT CGGGGGCTCA
CGATGGGGGG CGGCGCTGAA CGCATCAGCA TTCGGCGCGC AAGTGAGCGC CGCAGTAACG
ATGATTACGG CTGACCAGCT AAGCCAGTCC GAAATGTACC GCCGCCGTCG CGAAGAGTGG
GACATTCAGG CGAAGAACGC GCAAGCCGAT GTAGATCAAA TTAAGGCGCA ACAGACTACA
TTGCGCCATC AATGGGAAGC GGCGATGCTG CAGAGAGATT ATCTGCAGCG ACAGCAGGAG
CAGACTGAGG CGCAGCTGGA GTTTCTGAAA ATAAAAAGCA GTAGTAAGGC ACTGTATAGT
TGGATGCGCG GTCGCCTGCT TGCGATTTAC TCCCAGTTTT CCGATTTGGC GGTTGCGCGG
TGTGTGATGG CGGAGCAGGC CTTCCAATGG GAAACTCACA AGGTTGACAG CTTCATCAAG
CGGGGCGCAT GGCAGGATGC GTATTATGGG CTGCTCTGCG GCGAGGAACT TATGCGGAAT
CTGGCTGAGA TGGAGGCGGC CTACCTAATT CAGGACGCGC GTGCATTGGA AGTCGTGCGT
ACGGTTTCGC TGGCCGATTT CTATGCCGGG TTACCCGACG ATAAGCAATT CGATTTGGCA
GAGAAGGTGG TCACCTTTAT CGAAGAGAAA GGCGGTCGGG CGGGCAGCGA CGCGAACAGC
TTATTGCTTG AGAACGGTCG GCTGTCGGCG ACTGTGACGC TGCGTGACCT GAAGCTCGTG
GACGACTACC CGGCCAACAT GCAACTGGGC AGCCTGCGCC GCATCAAGCA GCTGAGCGTC
AGCTTACCGG CGCTGATCGG GCCGTATCAG GACATTCAGG CCGTGCTGTC TTACGGAGGC
AGTATCGTAT TGCCGCGCGG CTGCGAAGCA CTGGCGGTGT CGCGGGGCCT GGATGACAGC
GGTCAATTCG AACTGAACTT CAATGACGGC CGGTTCCTGC CTTTCGAGGG CATTCCCGTC
GACGATGTCG GTACGCTTAC GCTCGCTTTC CCCAACGCGC TCGGCAAGCA GGAGGCGATG
CTGCGGACGT TGAACGACAT CGTGCTGCAT ATTCGCTACA CGATCCTGCG ATAA
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| Protein sequence | MNTQTLSRLQ SSIEPLGIKT LIEIALFSFD EFRNKVRDVL SWHETRVMYR AAQRSLNESK
LYEALLLSRS NPQLSQAVGL AIAPPRVQLH DYESMLGQRA SQYVAPGSVA SMFSPAAYLT
EMYREARALH YANFPYHLDV RRPDLAALGL SQRNLDESVS TLDLSNEILQ AAIRAHDTSL
TGDESVPQRL ATWRAQGATP FNEAFEQVRR ALLTLDPEGK HEGTAPDVAG LMSAASRLGI
RAGISPELHA ILTEAVPDES ADQEFERNFG NVSVNELLNV RALAQYYDIS DDLCSEFIEN
YALKGYRQNR TNTLSRLAYP KMDQAGNLSL LHVTRFYASA ESSFVHYIEL IPARYSHNFE
LLRFSFASVP STAAKLEVFT SVNATRWQSI FVDEQFNDGK SDQEYRLPIN IEIPGDWQNI
QVSLNCYDSS GRLLITPNAG FIPGRNLDKN VLLEINKSIR AHKATGLAPA AVDAVAASVH
ADWTMDEAAV RRMLEMQSSM QRNAIDYDRA LCLCNGDISR LRFGGQSGQF DRLFNSPPLN
GYVFGTGGPR IDLKPDSSGD DLRKAVLKRA FQVDDVALYR LLLVADPGNK DGTIPNDLAH
LSALYRAHLL ADVHRLSVDD LALLMAGLGE AATGLIGISD EALFGLLHRL RTAVRWLNDM
KWNPYDLFVM TTTVYADTLT PDIGNLLEAL NNGLPDADLN DGELIEAMAP YVAASLRLTS
NEVACAVLLW LDQLQPNGMG VDAFWAAVAN HAPPPAAAIQ FCHALAQLAL VYQATGLDAN
SFRRLVEQPD SLVTLPEGAT VAGHDARTLM QLTAYAEWVG RLAGNAATVL SAFEVDALTP
AQLAQAMALD EQLLRQAGKQ AAQHEQIEDS ELLHTWPEID VVMQWINLAN GLGVAPKGVA
DWLALDYMRP ADAAVLAYPE WERVATSFVA ALPADQADTV AGTVAESLAA TLAGYYLAEV
ADPTLNLRTR DDLYSYLLID NQVSPQIKTT RIAEAMASIQ LYVHRALSRS EPQVLTAVSS
RQYFADWETY NKRYSTWAGV SQLVYYPENY IDPTLRIGQT GMMNNLLQSV NQAYLTADTV
DDAFNIYLTA FEQVANLDVV SAYHDNVNVD QGLTYFVGSN RSSEAEFSWR SVDHNKCHDG
QFAANAWSEW RAINCALKPY HGVIRPVVRN TRLHLVWLER TERAEAKAEG EDVFNEVTYQ
YWLKLAYLRY DGTWSAPLTY EVTTTLAKLQ LANDEAPGLY CAESPTHQSL LVLFYKVQAA
AAAAPAAGLV ILQDLSSREL TSEQSRYYRD NVHAQFDTPN RRRVNNRYGE HYQIPNSVTV
NSGFEWGAHQ ISRAFGGRIV GIMYEASLEK LYIQCNISVD VVFDVTKDVN GMAYLHLYTL
QRRATPGAMV TLFNEADPCF GMIWQHGASH LSLTSHEDYV FPPSDYYHGE PRIGVGIGAS
YGVAFDNYMG AGGYDIFSGG DVKRFSSIQV FKEVMGQYTI YKNSAILNTI DLNTSLPLDK
VDVIVDEGEG VKFRAIDYVK HAPEPSLRRM SFPFEKLTID ASRLVYVDNK ASVDISCEAR
FADGQLAGRE FFSIPVVRVV EGTSNVLSLH REDSGAQYMQ WGAYRVRLNT LFARQLIERA
AVGLDRILTL GTQYLAEPPL GEGGYVKVTL PAYNPTLHGS TRGVRLVLRS GTASASTEFA
FLNASLTDIV QHHMLFVPVS QVRAGDALDF PADLSTGLGV VLACQRGQFK AGQLRFDPAT
LKPTDFVKDS GWTSGRDADV QIDPIYIEPM DFGGANALYF WELFYYTPML VAQRLLVEQR
FDEAQRWLQY VWNPAGYVVE GLLQDYQWNV RPLEEDLGWN AESLDSTDPD AIAQVDPMHY
KVATFMRWLD LLLARGDRAY RQLERDTLSE AKMWYVQALQ LLGEQPYLPR AAEWSEPSLA
AAADETAQLA RLQALEALSA GGQPAPLTAN SLTALFLPQA NDVLQGYWRT LEQRLYNLRH
NLSIDGQPLS LAPYATPANP KALQSAAVSA SSGGKPLPPS YLTLWRFPQM LENAKSTVSQ
LMQFGSNLQG IIERQDAEAL SELLQNQAKD LVLISLSEQD QRLAEVDSSI LALTEAMEAA
TQRRNHYTKL YDENINSGEQ AVLGLRASSS AITATATALQ MAGALAEMVP NIFGFSIGGS
RWGAALNASA FGAQVSAAVT MITADQLSQS EMYRRRREEW DIQAKNAQAD VDQIKAQQTT
LRHQWEAAML QRDYLQRQQE QTEAQLEFLK IKSSSKALYS WMRGRLLAIY SQFSDLAVAR
CVMAEQAFQW ETHKVDSFIK RGAWQDAYYG LLCGEELMRN LAEMEAAYLI QDARALEVVR
TVSLADFYAG LPDDKQFDLA EKVVTFIEEK GGRAGSDANS LLLENGRLSA TVTLRDLKLV
DDYPANMQLG SLRRIKQLSV SLPALIGPYQ DIQAVLSYGG SIVLPRGCEA LAVSRGLDDS
GQFELNFNDG RFLPFEGIPV DDVGTLTLAF PNALGKQEAM LRTLNDIVLH IRYTILR
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