| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0161 |
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| Symbol | tcdB1 |
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| ID | 3693174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 215181 |
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| End bp | 219638 |
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| Gene Length | 4458 bp |
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| Protein Length | 1485 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637730415 |
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| Product | TcdB1 |
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| Protein accession | YP_335320 |
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| Protein GI | 76818089 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACCC CAGAGGAACC ATCGGGACTT CGTCAAGGTC CGTTGAGCCT GCCCAGCGGC
GGTGGTTCGA TCCGCGGTAT GGGGCAAACG CTGAGCGCAA TCGGGCCGGA CGGCATGGCG
GAAATGTCGC TGCCATTACC AATGTCGGCG GGTCGTGGCT ATGCTCCGGC GTTGGGGCTT
ACCTACAGTA GCGGTGCAGG CAACGGGCCA TTCGGCATTG GCTGGCAGAT GGGCACGATG
TCGATTCGAC GCCGGACGAG CCACGGTACG CCCCGTTACG ATTCGACTGA TAGCTTTCTT
GGGCCGGATG GCGAGGTGTT GCTGGTGGCA AGCGACACAG AAGGGCAGCC GGATGTCCGC
TCCGCCAACG CGTTGCAGGG TGTGATTTTG GACACACGCC ATACGATAAC TCGCTATCAA
CCCCGAACCG AAAGAAATTT CAGCAAGATT GAGCACTGGC AGCCCTCCGA CGACACCGGA
GCCGGTTTTT GGTTGATCAG ATCCGCCGAC GGGCAGGTCC ATATTCTTGG CAAAACCGCC
CAAGCAAGGA TATCCGCGCC GGGCAATTCA ACACACGTTG CGCAATGGTT GCTGGAGGAA
TCGATGTCGG CGGGCGGCGA ACATGTCTAC TACGAATATT ATGCGGAGGA CGATGTCGGT
TGCAGCGCTG CCGAAAAGCA CGCGCACCCA GATACCTCGG CGCAGCGTTA TCTCGCGATC
GTCCATTACG GCAATATCCA TCCGAGTGAC TGTTTGTTCG TCTTGAGCGA CACCGCGCCT
TCAAGCGCGG GCTGGCTGTT CGTCCTGGTG TTTGACTATG GCGAGCGCGC CGCTTCAATC
GACGCGGTGC CAAAGTTCGC ATCGTCCCAG CCCTGGTTGA GTCGAACTGA TCCATTCTCA
CGCTATGAGT TCGGTTTCGA GGTCCGCACG CGGCGGCTGT GCCGGCAAGT TCTTGCTTTC
CACCGTTTGC AGACGTTGGC AGGTGTGGCA AATGGAGATG ACGTCCCAGC GCTCGTGCAT
CGTATGGTGC TGCAGTACGA CGAGAATCCG GTGGTCAGCA TGCTGGTTGC TTGCCGGGTG
CTCGGACACG AATTGGACGG CCGTCCAGTA CCGATGCCGC CGCTGGAAAT CGACTATCAG
CGCTTCACCC CGACGGCCAT CTGGCAACCG ATGCGCGAGC TCGAAAATTT CGATCTCCCG
CAACGATGGC AACTAGTCGA TCTCTTCGGA GACGGGCTTG CCGGCGTGCT TTACAAGGAT
GACCACGCGT GGTGCTATTG TGCCCCACAG CGCCAAGAGG GCGGTGCGCC CGACGCGATC
ACTTGGCGCA AGAGCCACAT GTTGCCACAA ATCCCCGTGT TGAACGGCAT GGACACGGCC
ACACTGATCG ACGTCAATGG CGACGGCAGG CTGGAATGGC TGGTAACCCA TCCAGGGCTG
CAGGGCTACC ACAGAGTGTT GCCCGAGGGG AAGTGGACGC ATTTCACGCC ACTGACCGCG
TTACCGGTCG AGTATTTCCA TCCCCGAGCC CAACTTGCAG ACCTGATGGG CGCCGGTTTT
TCAGATCTGG TCCTGATCGG ACCCAAGAGT GTGCGCCTTT ACGCGAACGA GCGCGATGGC
TGGACGCAAG GCCAGACAGT CATTCAATCC GATGGCATCA CGCTGCCGAT TCCGGGCGCA
GACGCGTGCA AATTGGTGGC ATTCAGTGAC GTGCTCGGCT CAGGCCAGCC GCATCTGGTT
GAGATCAGCG CCGATGGGGT CACCTGCTGG CCGAATCTCG GACTTGGGCG TCTTGGCGTG
CCGCTGAAAC TACCCGGATT CAACCAGCCG ACTGAGACGT TCGATCCGGG GCGGGTGTTC
CTCGCCGATC TCGATGGATC CGGTGCCGTT GACCTGATCT ATGCGCACTC GGACCATTTG
CAGATTTACA CGAATCAGAG CGGTAATGGA TTTGCCGCGC CGCAAAGTTT GTCGTTGCCT
GACGGGGCGC GATTCGACGA TACCTGCCTG CTGCAGGCCG CGGATATCCA GGGTCTGGGT
GTTGTGAGTC TCGTTTTGAC GATTCCACAC CCGACGCCGC ACCACTGGCG TTGCGACTTG
TCTCGAAACA AGCCTTGGCT GATGAGTGAC GTTTGCAACA ATATGGGCGC GCACACAACA
TTGTACTACC GCAGCTCTGT ACAGTTCTGG TTGGACGAAA AAGCTGCCGC CAATGTTGAT
ACGCCACCCG TGACGAATCT ACCATTTCCT ATTCATACAT TGTGCCGTAA AGAACTGCTC
GATGAAATCA CTGGCAACAG GCTGGTGACG AACATGCGTT TTGCCCATGG TGTTTGGGAT
GGTAACGAGC GCGAGTTTCG CGGATTCGGC CGCGTGGAGC AGTTCGATAC CGATATGCGC
GCGTGCGGCG ACGTCTCGCA GCGAACCGCA CCGTCATTGA CCCGAAGCTG GTTCGCGACC
GGGATGCCGA CGGTCGACGA GCGGCTGGCG GATGAATTCT GGCACGGTGA CGCCCAAGCG
TTTGCCGGGT TTTCTCCGCG CTTTACCATA TGGGACACTG CCAGCGGGCA CGACGAACCA
TTGACGCCGT CAGAGTCCGC CCGCTACTGG CTGAGTCGCG CGATGAAGGG ACAGCTGCTG
CGCAGCGAAG TGTACGGGCT GGACGAGACG GGATCGGAAG GAATTCCGTA CACAGTAACA
GAGTCGCGAC TCCAGCTTCG GCTGATCGCC AGCGCCGAAA CGGAACAACC CGCAGCGTGG
CCATCGGTCG TGGAAATTCG CAGCTATCAG TACGAGCGCA TTGGCAGCGA TCCACAGTGC
TCACAGCAGG TGCAGCTGGC GCTGGACGCA TTTGGCTTTC CGCTGCAAAG CGTAGCAATT
GCGTATCCGA GGCGGCCGAA GCCGGTTGAC AATCCGTATC CGGAGACTTT GCCAGATGCG
TTGTTGGATA ATAGCTACGA CGCTCAGCAG GCAAGTGTGA CGCTGGTGCG GCGGACGACC
CGCTACCATC ACCTCACAAG CGGGGAAACG TGGCGACTCG GGCTGCCCGA CTGTGAGCGC
AGTGATGTCT TCACATACGA GAGCACGCGT GTGCCAGCGG ACGGCTTTTC ACTGGAAAAA
CTATCGGGTT CGGAGAGCCT GATTGGTGCG GGTCGGCCCT TTGCGTTCGC GGGGCAGCAA
CAGGTTCACT ACACGATGTG CCAGAGCGAG GAACCAATTG CATTTCCCAC CTCGCAGGCT
TTGGTTGCTT TCACCGAGAC AGCGATGCTG GACGATGCGG CGCTACTTGC GTACGACGGT
GTCGTCGCAC CTGAAGACCT CGGTCCATTA CTGCTTGAGT GCGGTTATTT ACGTGTGCCC
CGACTGCTCG GGGACGGTGC TGAGAACGCC GTCTGGGCGG CGAGGCGCGG CTATACCGAT
TACGGTGGCG CTCAGCAATT CTGGCGCCCG CTTCGTCAAC GCGCATCGTT GCTCACGGGT
GTCACGACAT TGACCTGGGA TCCGCACTAC TGCGTAGTCG CCGGAACTCG TGATGCCGCG
GGGTTGACCA TGCAGGCGGC CTTTGATTGG CGCTTCCTGT TGCCGTTTAA GGTAACGGAT
AGCAACAATA ATCAGCACCA TGGGGCGCTT GACGCCTTGG GGCGCTTGGT CAGTCGCCGC
TTCTGGGGGA CGGAAGGCGG ACTGCCTGCA GGATACTCCG CTCCAGAGGA TGCTCCGTTT
ACCGCTCCAT CATCCGTTGA TGAAGCATTG GCGCTGACTC CGGGAATCCC GGTGGCGGAA
TGCTTCGTCA TCGTGCCTGA TAGCTGGATG CCGAATTTGT CCGAATCGCA GGTAAGCGAG
CTGGATGGCG AAGACGCCTC GCTATGGCGC GACCTTAGGA TCGCAGGTGT GGTGAGCGAG
GATAATCGGG TCTGCGCGCT GGCTCGACGG CGTTGGAAGC AGCAAGGCAC TGCACTCGAT
AGCTGGCTCG CACAGGCCCA GCGTGTCCCG CCGCATACAT TGACGTTGAC GACCGATCGC
TACGATACGG ACCTGGCGCA GCAGTTGCGA CAACAGGTGA CGTTCAGCGA TGGTTTTGGC
CGCGTATTGC AGAGTTCGGT GCGTCACGAA GCTGGTGACG CTTGGCAACT GGCGGAGGAT
GGCTCGCTGG TGACGGGGGC AACCGGCGTG CCGATAACAG CGTACAGCGA TTTTCGTTGG
GCAGTCACTG GCCGAGTCGA GTACGACAAC AAGGGGCAAG TGATGCGGGT TTATCAGCCG
TACTTCCTGA ACGACTGGCG CTACGTTCGG GACGACCACG CACGAGCAGA TGCATTTGCC
GATCGGCAGG ATTACGATCC AATGGGCCGA CTGATCCGAG TTGTGACGGC CAAGGGCTAC
TTGCGGCGGA CGCAGTACTA CCCGTGGTTC GTGGTGAAGG AGGACGAAAA CGACACCGAG
GCGCTGGAGC AGCGGTGA
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| Protein sequence | MRTPEEPSGL RQGPLSLPSG GGSIRGMGQT LSAIGPDGMA EMSLPLPMSA GRGYAPALGL
TYSSGAGNGP FGIGWQMGTM SIRRRTSHGT PRYDSTDSFL GPDGEVLLVA SDTEGQPDVR
SANALQGVIL DTRHTITRYQ PRTERNFSKI EHWQPSDDTG AGFWLIRSAD GQVHILGKTA
QARISAPGNS THVAQWLLEE SMSAGGEHVY YEYYAEDDVG CSAAEKHAHP DTSAQRYLAI
VHYGNIHPSD CLFVLSDTAP SSAGWLFVLV FDYGERAASI DAVPKFASSQ PWLSRTDPFS
RYEFGFEVRT RRLCRQVLAF HRLQTLAGVA NGDDVPALVH RMVLQYDENP VVSMLVACRV
LGHELDGRPV PMPPLEIDYQ RFTPTAIWQP MRELENFDLP QRWQLVDLFG DGLAGVLYKD
DHAWCYCAPQ RQEGGAPDAI TWRKSHMLPQ IPVLNGMDTA TLIDVNGDGR LEWLVTHPGL
QGYHRVLPEG KWTHFTPLTA LPVEYFHPRA QLADLMGAGF SDLVLIGPKS VRLYANERDG
WTQGQTVIQS DGITLPIPGA DACKLVAFSD VLGSGQPHLV EISADGVTCW PNLGLGRLGV
PLKLPGFNQP TETFDPGRVF LADLDGSGAV DLIYAHSDHL QIYTNQSGNG FAAPQSLSLP
DGARFDDTCL LQAADIQGLG VVSLVLTIPH PTPHHWRCDL SRNKPWLMSD VCNNMGAHTT
LYYRSSVQFW LDEKAAANVD TPPVTNLPFP IHTLCRKELL DEITGNRLVT NMRFAHGVWD
GNEREFRGFG RVEQFDTDMR ACGDVSQRTA PSLTRSWFAT GMPTVDERLA DEFWHGDAQA
FAGFSPRFTI WDTASGHDEP LTPSESARYW LSRAMKGQLL RSEVYGLDET GSEGIPYTVT
ESRLQLRLIA SAETEQPAAW PSVVEIRSYQ YERIGSDPQC SQQVQLALDA FGFPLQSVAI
AYPRRPKPVD NPYPETLPDA LLDNSYDAQQ ASVTLVRRTT RYHHLTSGET WRLGLPDCER
SDVFTYESTR VPADGFSLEK LSGSESLIGA GRPFAFAGQQ QVHYTMCQSE EPIAFPTSQA
LVAFTETAML DDAALLAYDG VVAPEDLGPL LLECGYLRVP RLLGDGAENA VWAARRGYTD
YGGAQQFWRP LRQRASLLTG VTTLTWDPHY CVVAGTRDAA GLTMQAAFDW RFLLPFKVTD
SNNNQHHGAL DALGRLVSRR FWGTEGGLPA GYSAPEDAPF TAPSSVDEAL ALTPGIPVAE
CFVIVPDSWM PNLSESQVSE LDGEDASLWR DLRIAGVVSE DNRVCALARR RWKQQGTALD
SWLAQAQRVP PHTLTLTTDR YDTDLAQQLR QQVTFSDGFG RVLQSSVRHE AGDAWQLAED
GSLVTGATGV PITAYSDFRW AVTGRVEYDN KGQVMRVYQP YFLNDWRYVR DDHARADAFA
DRQDYDPMGR LIRVVTAKGY LRRTQYYPWF VVKEDENDTE ALEQR
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