| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2206 |
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| Symbol | opcP1 |
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| ID | 3688868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 2463412 |
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| End bp | 2464575 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637728662 |
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| Product | outer membrane porin |
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| Protein accession | YP_333601 |
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| Protein GI | 76812053 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0690503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAG ACCGTGTAAA TAAATTAGTT ATCTTAAGTA ATATTTTGGC GGGATGCTTG
CTTCCGGGCA TTGCAACTGC GCAATCTTCG GTGACGTTGT ACGGCGTGAT CGATGAGGGC
ATCGATTACG TCAACAACAG CGGCGGCCAG CATTTGTGGC GGATGCGCGA CGGTACCTAC
GACGGTATGT ATGGTAGCCG TTGGGGTCTC AAGGGAAGCG AAGATCTGGG CGGCGGATTG
AGTGCGCTCT TCAAGCTCGA AGCGGGGTTC AGCCTCGAAA ACGGGCAGAT GCGTCAGGGC
GGCAGGGAGT TCGGGCGTCA GGCATACGTC GGCCTTTCCA AAACGGATCT CGGTACGGTG
ACCTTCGGAC GCCAGTACGA CTCTGTCGTC GACTTCGTTC AGCCGGTAAC GGCCGTGGGC
CAATTCGGCG GCCCTTTCGT GCGTGGCGGC GACATCGACA ACACAGACAA TTCGTTCCGC
GTCGACAATT CGATTAAGTA TGCGAGCCCG TCATTCGGCG GTTTCACATT CGGCGGCATG
TATTCGTTTA CGAATTCGAA CGCGCCCGGC CTGGGAACGA CCGGCATGTG GAGCTTGGGT
GCGGCCTATT CGCATGGCGG CTTCAATGCG GGCGCGGCCT ATTTCTACGC GAAGAATCCG
GCGGCTCGTT TCACGGACGG CAACTTCATC GGCAATACCA CCGGCGCGGC GATTGGTGCG
AGCGGCCCGT TCAGCTACGT CGGCGCCCCG CGCAACGAGC GCATCATGGG TATCGGGGCG
GATTATGCCT TCGGCTCGGC GACGGCGGGG ATCGACTACA CGAACACAAA GTTCGACGAC
GCAAATGGTA CGACGAGTTC CGTTACGTTC AGCAACTACG AGGTGTGGGG ACAGTACAAG
GTCACGCCGG CCGCAACGCT GGGGGCCGCT TACGTCTATA CCGACGGCAA GGTGAACTAC
AACGGGGCGA GGCCAAAATA CCATCAAGTC TCGCTGATGG GCAGCTATTC CGTATCCAAG
CGTACGTCGT TCTATGCGAT GGCGGGGTTC CAACAGGCGG CAGGGGATGC CAAGCAGGCT
GACATCTTCG ACTTCTCGAT CGCCGACGCA TCGACAACCA ATCGCCAATT GATGTTCCGT
CTCGGCATGC TGCATCAGTT CTAA
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| Protein sequence | MKLDRVNKLV ILSNILAGCL LPGIATAQSS VTLYGVIDEG IDYVNNSGGQ HLWRMRDGTY
DGMYGSRWGL KGSEDLGGGL SALFKLEAGF SLENGQMRQG GREFGRQAYV GLSKTDLGTV
TFGRQYDSVV DFVQPVTAVG QFGGPFVRGG DIDNTDNSFR VDNSIKYASP SFGGFTFGGM
YSFTNSNAPG LGTTGMWSLG AAYSHGGFNA GAAYFYAKNP AARFTDGNFI GNTTGAAIGA
SGPFSYVGAP RNERIMGIGA DYAFGSATAG IDYTNTKFDD ANGTTSSVTF SNYEVWGQYK
VTPAATLGAA YVYTDGKVNY NGARPKYHQV SLMGSYSVSK RTSFYAMAGF QQAAGDAKQA
DIFDFSIADA STTNRQLMFR LGMLHQF
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