Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2159 |
Symbol | |
ID | 3689745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2365335 |
End bp | 2366495 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637728615 |
Product | Beta-eliminating lyase |
Protein accession | YP_333554 |
Protein GI | 76810387 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACGCA CGACGGCGGC CGCGAAGGCG GCCGTCTCGA CGACGAACCG GCGCAGCGAG GCCGGACGAC CCAACCAATG GATCGATGCG ATGATTGATT TCCTGAGCGA CACGGTGACG CTGCCGACCG CGGAGATGCG GCACGCGATG TTTACCGCGA ATGTGGGCGA CGATTGCTAC GGCGAGGATC CGACGGTCAA CGAGCTCGAA TCGGTGGCGG CCGGACTGAC CGGCAAGGAA GCGGCGGCGT TCGTCACGAG CGGCACGCTC GGCAACCTGA GCGCGCTGCT CGCGCAATGC CCGCGCGGGC ACGAGGTGAT CCTCGGCGAT CGCTCCGACC TGTACAACTA CGAGGCGGGC GGCGTGTCGC TCGTCGGCGG CGCGGTGTTG CACCCCGTCG AGACCGCCGA CGACGGCAGC CTGCCGCTCG AGCGGCTGCG CGCGGCGATC CGCGACAAGC GCGACCCCCA GTGCGCGCCC GCCGCGGTGA TCGCGCTCGA GAATCCGCAT TGCCTCGCCG GCGGCCGCGT GCTGTCGCTC GACTACCTGC GGCGCGTGCG CGCGCTCGCC GACGAGCACG GGCTCGCCGT GCACATGGAC GGCGCGCGTC TGTTCAACGC GCAGGCGAGC CTCGGCACGC CGGCGGCCGA GATCGTCGCG CACGTCGATT CGGTCCAGTT CTGCCTGTCG AAGAGCCTCG CCGCGCCGTA CGGCTCGATG GTGTGCGGCA GCGCCGCCCT GATCGATCGC GTGAAGCGCT ATCGGAAGCT GCTCGGCGGC GGCACGCGGC AAGCCGGCAT CATGGCGGCC GCCGGGCTCG TCGCGCTGCG CACGATGGTC GCGCGGCTCG CGGACGATCA CCGCCGCGCG GCGCGCCTCG CCGCGGAGCT GGCGCGGATT CCGGGCGTCG CGCTGCGCTC GGCGGTGATC GAGACGAACA TGGTGTTCTT CGACGTCGCC GAGCCGGGCA ACGAGGCGTT TCTCGCCGCG CTGCGCGACG CGGGCATCCG GATGGGCGTG CTCGGCGACG GCGTGATCCG GGCCGTCGTG CACTACATGA TCGACGACGA CGCGATCAGC CGCACCGTCG ACGCCGTCCG CGCGATTGTT CTTCCGTTCG CCCCGGCGTT AGCGCCGGCC GCCGCATCGC AGGCGCAATG A
|
Protein sequence | MTRTTAAAKA AVSTTNRRSE AGRPNQWIDA MIDFLSDTVT LPTAEMRHAM FTANVGDDCY GEDPTVNELE SVAAGLTGKE AAAFVTSGTL GNLSALLAQC PRGHEVILGD RSDLYNYEAG GVSLVGGAVL HPVETADDGS LPLERLRAAI RDKRDPQCAP AAVIALENPH CLAGGRVLSL DYLRRVRALA DEHGLAVHMD GARLFNAQAS LGTPAAEIVA HVDSVQFCLS KSLAAPYGSM VCGSAALIDR VKRYRKLLGG GTRQAGIMAA AGLVALRTMV ARLADDHRRA ARLAAELARI PGVALRSAVI ETNMVFFDVA EPGNEAFLAA LRDAGIRMGV LGDGVIRAVV HYMIDDDAIS RTVDAVRAIV LPFAPALAPA AASQAQ
|
| |