| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1948 |
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| Symbol | |
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| ID | 3690741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 2120870 |
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| End bp | 2121805 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637728404 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_333347 |
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| Protein GI | 76812186 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000693981 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGAA ACGGCTTTTC ACCGATGACG ACGGCGGCGC TCGCGGCGCT TGCGCTGTCG
CTCGCGGCGT GCGGGGCGTT CAAGGAGTCG GGCTACGGGA TCGGCGCGCA GGCCGAGCGC
GCGGCGCTGA TGCAGGCCGC GGCCGACAAG AACGCGACGC CCGACACGCC CGGCATGTAT
CTCGGCCTCA TCGGCCGGAT GCAGTCGCAG GGCCTCTATT ATGCGTCGCT CGCGCACATC
GACGCCTACG AGAAGCAGTA CGGCGCGTCG CCCGACACGA TCCTGCTGCG CGCGGACGCG
CTGCGCTCGA CCGATCAGCC GGCCGCGAGC ACGGTGGCGT ACCGGCAACT GCTCGGCACG
CCGCTCGCCG CGCGCGGCTA TCGCGGCCTG GGCCTCCTCG CCGGCGCGTC GGGCGATTTC
GACGCCGCGT CGCAGGCGCT CGCGCAGGCG AGCGCGCTCG CGCCGACCGA TTCGCCGACG
CTGTCCGATC TCGCGTATGC GCGCATGCGC AGCGGCGACA TCGCAGGCGC GCGCGTGCCG
TTGATGAAGG CGGCGGAGCT CGACCAGAAC AACCCGAAGA TCCTCAGCAA TCTCGCGCTG
TTTCTGCTCG CGACGGGGCA GACGCGCGAC GCGCTCGGCC TGATGAACCA GCTGAAGCTC
GCGCCCGCGG TGCGCGCGGA AATCCGCAAC GACGCGACGA GGATCGCGGC CGCGGCGCGT
GCGCGACAGC GCGCGCTCGC GCGGCCGGGC GCGCCTGGCG CGGCCGCCTC GGCGGGCGCG
ACGCTCGCCG CGAGCGCGGC GGGTTCGAAC GGCGGGGCGG CGGCCGGCAA GGGCGCCGTG
GCCGGCGCGG GGGCGTCAGC GCCCGGCGCG GCCGCAACGG CCACGGCCGC GGCGTTCGAG
CCGACGGTGC CGCTCTTGCA GCGATTCTCG CAATGA
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| Protein sequence | MRRNGFSPMT TAALAALALS LAACGAFKES GYGIGAQAER AALMQAAADK NATPDTPGMY
LGLIGRMQSQ GLYYASLAHI DAYEKQYGAS PDTILLRADA LRSTDQPAAS TVAYRQLLGT
PLAARGYRGL GLLAGASGDF DAASQALAQA SALAPTDSPT LSDLAYARMR SGDIAGARVP
LMKAAELDQN NPKILSNLAL FLLATGQTRD ALGLMNQLKL APAVRAEIRN DATRIAAAAR
ARQRALARPG APGAAASAGA TLAASAAGSN GGAAAGKGAV AGAGASAPGA AATATAAAFE
PTVPLLQRFS Q
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