Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1355 |
Symbol | dnaE |
ID | 3689353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1422263 |
End bp | 1426024 |
Gene Length | 3762 bp |
Protein Length | 1253 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637727810 |
Product | DNA polymerase III, alpha subunit, form 1 |
Protein accession | YP_332764 |
Protein GI | 76810449 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.404824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTGCG CGGGCTCACA CGGCGCGCGC CGGTTCGGCG CCCGGCTCCG CGCGCCGGCC CGGCGTGCCG GAATCGCCCG GATGGCACGC GGGGCAGCAC TTGCCGGGCA CGTAGAGCGG CGACTGTTGC GCATCGGCCG GCACGACCGC GCGGCACGCG AAGCACGTGA CGTCGGCTGT CGGCGCGAGC TGCGGGTTGA GCGCGGTACG GTAATCGAAC ACGAAGCAGT CGCCGTGGTA ATGGGCACCG CCGACTTCCT CGAAATACTT GAGGATCCCG CCCTCGAGCT GATAGACGTT CTCGATGCCG ACGTCCTTCA TGTGGATCGC CGCCTTCTCG CAGCGGATGC CGCCCGTGCA GAACGACACG ATCGTCTTGC CCTCGAGGTC CGCGCGGTTC GCCTCGATCA CGGCGGGAAA CTCGCTGAAT TTGTCGATCC GGTAATCGAG CGCGCGATCG AAGGTCCCCA CGTCGACTTC GAACGCATTG CGCGTGTCGA GCATCACGAC GGGGCGGCCC GCGTCGTCGT GCCCCTGGTC GAGCCACGCT TTGAGCGTGC GCGCGTCGAC GGACGGCGCG CGGCCGAGCT CCGGCTTGAT CGCCGGCTTC TTCATCGTGA TGATCTCGCG CTTCAGGCGC ACGAGCATCC GGCGAAACGG CTGCGAATCG GACAGGCTCT CCTTGAACGG CAGGTCCGCG AACTTGCCCT CGAAGAGCGG ATCGTGGCGG ATGTAATCGA CGAACGCGTC GGTCGCCTCG CGTGGGCCCG CGATGAACAG ATTGATGCCT TCGGGCGCGA GCAGGATCGT GCCGCGCAGC CCGAGCGTGT TGCAGCGCGC GGCGACGAGC GGCCGCCATT GCTCGATCGA ATCGAGCGAG ACGAAACGGT AGGCGGCGAG ATTGACGGTG GTCATGAGGT TCGGACGGTA AGGCGGCTGC GGCCCGGCGG CGAAGCCGCG CGGCTCGGGG GCGGCGCGCG CGGCGAGCGC CTGGGCGCAA GCGGACGAAA ACGGGAAAAA CGTGGAAAAG CCGTATTATC CCGCAAACCG CGCGGCTTTT TCGCAGTCGG CCGAACGGCC GACGTGTTCG GCGCGCGCCG CGGCGCCGTC GCAAGCGCGC CGGCGCGCCG GCGTGTCGCG GCCGGGCCCG GAGCCGGGGA GTCTCGCGCC GCGCGGTTGC GAAGGCGCGG TCGTCGGCGT GTCGAACGGC GAGCCCACCG ACGTGTCGTT CTCCGCGTGG CCGATGCGTT CGCGGCCGCC GGCCACGCCA TCTCGAAAAG GGGCGAAACG AGGGCGCGAA GCGCGGATGC GGACGTTGCC GCGTCGCCGC GAACGGGGCG CCGGCGGCCG GAACCCGTGA TCGAACCCGA CGATCCGAAT CCGCGATCGG AGCCGGCCAC GCGCGCCGCG GCGAACTGCC GTCGTGCGCG GCTTCGCGGC CCGCCGCCCG CGCCGGTCTT GGCCCGACGG CCAACGCGGC GATTTTTTGC CCGCCGCGAA CGGTATCGGG TTCCCGGGCC GGCTACAATA GCGCCCATGT CAGATCCCCG TTTCGTTCAC CTCCGCGTCC ACTCCGAATT CTCGATTGCC GACGGCATCG TGCGTCTCGA CGATATCGTC AAGTCGGCGG CCGAAGACGG TCAGGGCGCG CTTGCACTGA CCGACCTCGG CAACGCGTTC GGTCTCGTCC GTTTCTACAA GGAAGCCCGC GATGCGGGCA TCAAGCCGAT CGCCGGCTGC GATGTCTGGA TCACCAACCA CGACGATCGC GACAAGCCGT CGCGGCTGCT GCTGCTCGTC AAGGACAAGC GCGGCTACCT GAACCTCTGC GAGCTGCTGT CGAAGGCGTG GCTCACGAAC CAATACCGCG GCCGCGCGGA GCTCGACGCG AGCTGGCTCG AAGGCGAGCT CGCCGAAGGG CTGCTCGCGC TGTCAGGCGC GCAGCAGGGC GACATCGGCC TCGCGCTCGC GGCGGGCAAC GAGGCGGCCG CGCGCCGCCA CGCGCAGCGC TGGGCGCGGG TGTTCCCGGG CGGTTTCTAT ATCGAATTGC AGCGCTACGG CCAGCCGGGC GCGGAAGCGT ACATCCAGCA GGCGGTGGCG ATCGCGGCGG AGCTGAAGCT GCCCGTCGTC GCGACGCATC CGCTGCAGTA CATGACGGCC GACGATTTCA CCGCGCACGA GGCGCGCGTG TGCATCTCGG AAGGCGACAT CCTCGCGAAT CCGCGCCGCC AGAAACGCTT CACGACCGAG CAGTTCTTCC GCACGCAGGG CGACATGGCC GCGCTGTTCG CCGATCTGCC CTCGGCGCTC GCGAACACGG TCGAGATCGC CAAGCGCTGC AACCTGACGC TCGAGCTCGG CAAGCCGAAG CTGCCGCGGT TCCCGACGCC CGACGGCATG TCGCTCGACG ACTACCTCGT GCAGTTGTCG CAGGAAGGGC TCGACAAACG CCTCGTGCAG CTCTACCCGG ACGAGGCCGA GCGCGAAGCG CAACGCGGGA AGTACAACCA GCGTCTCGAT TTCGAGTGCG GCACGATCAA GAAGATGGGC TTTCCGGGCT ACTTCCTGAT CGTCGCGGAC TTCATCAACT GGGCGAAGAA CAACGGCGTG CCGGTGGGCC CCGGGCGGGG CTCGGGCGCG GGCTCGCTCG TCGCGTATTC GCTCGGCATC ACCGACCTCG ATCCGCTGCG CTACAACCTG CTGTTCGAGC GCTTCCTGAA CCCGGAGCGG GTGTCGATGC CCGACTTCGA CATCGACTTC TGCCAGCACG GCCGCGACCG CGTGATCCAG TACGTGAAGG AGAAGTACGG CGCGGACGCG GTGTCGCAGA TCGCCACCTT CGGCACGATG GCCGCGAAGG CGGCCGTGCG GGATATCGGC CGGGTGCTCG ATCTCGGCTA CATGTTCACC GACGGCGTCG CGAAGCTGAT CCCGTTCAAG CCGGGCAAGC ACGTGACGAT CGCCGACGCG ATGAAGGAAG AGCCGCTCCT GCAGGAGCGC TACGACAACG AGGACGAAGT CCATCAGTTG CTCGATCTCG CGCAGCGCGT GGAGGGCCTC ACGCGCAACG TCGGGATGCA CGCGGGCGGC GTGCTGATCG CGCCCGGCAA GCTGACCGAT TTCTGCCCCC TCTACACGCA GGGCGACGAA GGCGGCGTCG TCAGCCAGTA CGACAAGGAC GACGTCGAAG CCGTCGGCCT CGTGAAGTTC GACTTTCTCG GCCTCACGAC GCTCACGATT CTCGACTGGG CCGAGCGCTA CATTCGCCGT CTCGATCCGA GCAAGGAGAA CTGGTCGCTC GCGCAGGTGC CGCTCGACGA TCCGACGTCG TTCCAGATCC TCAAGAAGGC CAACACGGTC GCCGTGTTCC AGCTGGAAAG CCGCGGCATG CAGGGGATGC TGAAGGACGC GCAGCCCGAC CGCTTCGAGG ACATCATCGC GCTCGTGTCG TTGTACCGGC CGGGCCCGAT GGACCTGATT CCGAGCTTCT GCGCGCGCAA GCACGGGCGC GAGAAGGTCG ACTATCCGGA TCCGCGCGTC GAGCCTGTCC TGAAAGAGAC CTACGGGATC ATGGTCTATC AGGAGCAGGT GATGCAGATG GCGCAGATCA TCGGCGGCTA TTCGCTCGGC GGCGCGGACT TGCTGCGTCG CGCGATGGGC AAGAAGAAGC CCGAGGAGAT GGCCAAGCAT CGCGAGATCT TCGCCGAGGG CGCCGCGAAG AACGGCCTCA CGCGCGAGAA GTCCGACGAG ATCTTCGACT GA
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Protein sequence | MGCAGSHGAR RFGARLRAPA RRAGIARMAR GAALAGHVER RLLRIGRHDR AAREARDVGC RRELRVERGT VIEHEAVAVV MGTADFLEIL EDPALELIDV LDADVLHVDR RLLAADAARA ERHDRLALEV RAVRLDHGGK LAEFVDPVIE RAIEGPHVDF ERIARVEHHD GAARVVVPLV EPRFERARVD GRRAAELRLD RRLLHRDDLA LQAHEHPAKR LRIGQALLER QVRELALEER IVADVIDERV GRLAWARDEQ IDAFGREQDR AAQPERVAAR GDERPPLLDR IERDETVGGE IDGGHEVRTV RRLRPGGEAA RLGGGARGER LGASGRKREK RGKAVLSRKP RGFFAVGRTA DVFGARRGAV ASAPARRRVA AGPGAGESRA ARLRRRGRRR VERRAHRRVV LRVADAFAAA GHAISKRGET RARSADADVA ASPRTGRRRP EPVIEPDDPN PRSEPATRAA ANCRRARLRG PPPAPVLARR PTRRFFARRE RYRVPGPATI APMSDPRFVH LRVHSEFSIA DGIVRLDDIV KSAAEDGQGA LALTDLGNAF GLVRFYKEAR DAGIKPIAGC DVWITNHDDR DKPSRLLLLV KDKRGYLNLC ELLSKAWLTN QYRGRAELDA SWLEGELAEG LLALSGAQQG DIGLALAAGN EAAARRHAQR WARVFPGGFY IELQRYGQPG AEAYIQQAVA IAAELKLPVV ATHPLQYMTA DDFTAHEARV CISEGDILAN PRRQKRFTTE QFFRTQGDMA ALFADLPSAL ANTVEIAKRC NLTLELGKPK LPRFPTPDGM SLDDYLVQLS QEGLDKRLVQ LYPDEAEREA QRGKYNQRLD FECGTIKKMG FPGYFLIVAD FINWAKNNGV PVGPGRGSGA GSLVAYSLGI TDLDPLRYNL LFERFLNPER VSMPDFDIDF CQHGRDRVIQ YVKEKYGADA VSQIATFGTM AAKAAVRDIG RVLDLGYMFT DGVAKLIPFK PGKHVTIADA MKEEPLLQER YDNEDEVHQL LDLAQRVEGL TRNVGMHAGG VLIAPGKLTD FCPLYTQGDE GGVVSQYDKD DVEAVGLVKF DFLGLTTLTI LDWAERYIRR LDPSKENWSL AQVPLDDPTS FQILKKANTV AVFQLESRGM QGMLKDAQPD RFEDIIALVS LYRPGPMDLI PSFCARKHGR EKVDYPDPRV EPVLKETYGI MVYQEQVMQM AQIIGGYSLG GADLLRRAMG KKKPEEMAKH REIFAEGAAK NGLTREKSDE IFD
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