Gene Ava_5020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5020 
Symbol 
ID3679033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6308223 
End bp6308648 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content42% 
IMG OID637720380 
Producthypothetical protein 
Protein accessionYP_325512 
Protein GI75911216 
COG category[S] Function unknown 
COG ID[COG2149] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.166016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.244596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATAG AAGCCGAAAA ATTGCCAAGT AAAAATTCAG TAAAAAAGAA ATATAGATCC 
GATAGAATCC GAGATCATTT AGCTAATGAA CGTACCTATC TAGCATGGAT GCGGAGTGGT
ATTGCACTCA TGGGTTTTGG TGTGTTGATT GTGCGATTGC GGATTCTTCA ACCTCCATTA
GCATCACAGC CTCCTGGTAA TGGTTGGAAG TTGGGATTGG CATTTGCCTT AGTCGGAGTA
TTGACCGTGT TACTTTCAAC ACAGCATTAT TTCGCTGTTC GCAAAGATAT TGACGAGGAT
ACTTATCAAC CACCAGACCG TTGGATACTT CTGGCGAGTC TGGCTGTGAT TCTCCTGGGA
GGGGGTGTAC TGTACTATGT GTTTACCGTT CCTCTAGATT ATCTGAATAC TTATATTCTG
GAGTAA
 
Protein sequence
MTIEAEKLPS KNSVKKKYRS DRIRDHLANE RTYLAWMRSG IALMGFGVLI VRLRILQPPL 
ASQPPGNGWK LGLAFALVGV LTVLLSTQHY FAVRKDIDED TYQPPDRWIL LASLAVILLG
GGVLYYVFTV PLDYLNTYIL E