Gene Ava_4860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4860 
Symbol 
ID3679280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6123641 
End bp6124309 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content37% 
IMG OID637720217 
Producthypothetical protein 
Protein accessionYP_325352 
Protein GI75911056 
COG category[S] Function unknown 
COG ID[COG4340] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000808098 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000198806 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAATAG TCGGGGGAAT GACGGAATTA GAATATGCCT TTTTGTTCAC CCTCAGAAAG 
GTAAATTCAA TCGAGTTAGG AGATTTTAAG CCATTTTATA ATAATTTACC AGTTGATCCT
TATATTAAAG GCAACTATCG TCTGCGAAGA TTATCTCGAT TTATAGTTGC AGAGGATCAG
TTAGTTAAGC TACCTCATGG TTATCTGTTT CAAAGTAAAG ATTACAATCC ATTAGTTGGC
GATATTAAAA GAGAATTTGC AGAATTAGAT GAGGCACTCA TCGGACTTAA TAGTTTTAAA
AATCTGGTAT TAGCATTTAG CGATTCTTGC AAACTCCATC CAGAAGCAGA AATCGGCGTG
CATCAAATCA GAACTACTTG TTCTCCAGAT AATTTTGGCA ATCCCGCACC TGAGGGTATC
CATCAAGATG GTACAGATTT TATCGGTATC TTCTCTGTTG ATAGAGAAAA TATTCAAGGT
GGGGAAACGC ACTTGTATAC TGCCAAAAAA GATAAGCCTG TATTCAGTAA GATTCTCAAT
CCCGGAGAGT TATTATTGGT CAACGACCAT GATTTTTATC ACTTTACTAC TCCGATAAAA
CCGCAGACAG AAGCTCAAGG TATTAGGGAT GTTTTTGTAT TAACTTCTCC TAGTTTGCTG
ACTGATTAA
 
Protein sequence
MQIVGGMTEL EYAFLFTLRK VNSIELGDFK PFYNNLPVDP YIKGNYRLRR LSRFIVAEDQ 
LVKLPHGYLF QSKDYNPLVG DIKREFAELD EALIGLNSFK NLVLAFSDSC KLHPEAEIGV
HQIRTTCSPD NFGNPAPEGI HQDGTDFIGI FSVDRENIQG GETHLYTAKK DKPVFSKILN
PGELLLVNDH DFYHFTTPIK PQTEAQGIRD VFVLTSPSLL TD