Gene Ava_4757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4757 
Symbol 
ID3679488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5983992 
End bp5984855 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content46% 
IMG OID637720113 
Product2,3-dimethylmalate lyase 
Protein accessionYP_325249 
Protein GI75910953 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000491467 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTA GCCACAAACT GCGGCAGTTA CTTGCAAATC CTGAAATTAT TGTAATTCCT 
GGTATCTACG ATTGCCTGAG TGCCAAACTG GCTGAAAATA TCGGTTTTGA TGTCGTGGCT
ACCAGTGGTT TTGGTATTGC TGCATCTACT TTGGGTTTGC CAGATTACGG TTTTCTCACA
GCTACGGAAG CGCTCTACAG TGTGGGGCGT ATTGCTCAGT CTGTGAGTGT TCCCCTCATT
GCCGATTTAG ATACTGGCTA TGGCAATGCT TTAAATGTGA TGCGGACTAT CAAGGATGCT
GTGCAGTTGG GCGTGGCGGG CGTATTGTTA GAAGACCAAG AATGGCCGAA AAAGTGCGGA
CATTTTGAAG GGAAGCGAGT TATACCCACA TCTGAACACG CTGGCAAAAT TCGTGCAGCA
GTAGAGGCGC GGGGTGACAG TGGTTTAGTC ATTATTGCTC GTACCGATGC CCGTGGTCCA
TTGGGTTTAG AGGAAGCGAT CGCCCGTGGT CATGCTTACA TTGAGGCAGG CGCAGATATA
CTATTTGTGG AAGCTCCCCA GTCTGTGGCA GAATTGAAAG CGATCGCTTC AGCTTTCCCC
CACACACCCC TAGTAGCCAA TATCGTTGAA GGCGGCAAAA CTCCCCCACT ATCCGCATCA
GAACTACAAG ATTTAGGCTT TAAAATCGTG TTTTTCCCCC TTACTGGTTT ATTGGCAGTA
ACGCAAACTT TAACAGCTTG CTTAAGTCAT ATCAAAGAAC AGGGAACCAC AGCTAATTTT
ACTGACATAG TGAACTTTCA AGATTTTCAA GCCCTTGTCG GCGTTCCCCA ATTTCTGCAA
ATGGAACAAA AGTTTAAATC CTAA
 
Protein sequence
MSSSHKLRQL LANPEIIVIP GIYDCLSAKL AENIGFDVVA TSGFGIAAST LGLPDYGFLT 
ATEALYSVGR IAQSVSVPLI ADLDTGYGNA LNVMRTIKDA VQLGVAGVLL EDQEWPKKCG
HFEGKRVIPT SEHAGKIRAA VEARGDSGLV IIARTDARGP LGLEEAIARG HAYIEAGADI
LFVEAPQSVA ELKAIASAFP HTPLVANIVE GGKTPPLSAS ELQDLGFKIV FFPLTGLLAV
TQTLTACLSH IKEQGTTANF TDIVNFQDFQ ALVGVPQFLQ MEQKFKS