Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4757 |
Symbol | |
ID | 3679488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5983992 |
End bp | 5984855 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637720113 |
Product | 2,3-dimethylmalate lyase |
Protein accession | YP_325249 |
Protein GI | 75910953 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000491467 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCTA GCCACAAACT GCGGCAGTTA CTTGCAAATC CTGAAATTAT TGTAATTCCT GGTATCTACG ATTGCCTGAG TGCCAAACTG GCTGAAAATA TCGGTTTTGA TGTCGTGGCT ACCAGTGGTT TTGGTATTGC TGCATCTACT TTGGGTTTGC CAGATTACGG TTTTCTCACA GCTACGGAAG CGCTCTACAG TGTGGGGCGT ATTGCTCAGT CTGTGAGTGT TCCCCTCATT GCCGATTTAG ATACTGGCTA TGGCAATGCT TTAAATGTGA TGCGGACTAT CAAGGATGCT GTGCAGTTGG GCGTGGCGGG CGTATTGTTA GAAGACCAAG AATGGCCGAA AAAGTGCGGA CATTTTGAAG GGAAGCGAGT TATACCCACA TCTGAACACG CTGGCAAAAT TCGTGCAGCA GTAGAGGCGC GGGGTGACAG TGGTTTAGTC ATTATTGCTC GTACCGATGC CCGTGGTCCA TTGGGTTTAG AGGAAGCGAT CGCCCGTGGT CATGCTTACA TTGAGGCAGG CGCAGATATA CTATTTGTGG AAGCTCCCCA GTCTGTGGCA GAATTGAAAG CGATCGCTTC AGCTTTCCCC CACACACCCC TAGTAGCCAA TATCGTTGAA GGCGGCAAAA CTCCCCCACT ATCCGCATCA GAACTACAAG ATTTAGGCTT TAAAATCGTG TTTTTCCCCC TTACTGGTTT ATTGGCAGTA ACGCAAACTT TAACAGCTTG CTTAAGTCAT ATCAAAGAAC AGGGAACCAC AGCTAATTTT ACTGACATAG TGAACTTTCA AGATTTTCAA GCCCTTGTCG GCGTTCCCCA ATTTCTGCAA ATGGAACAAA AGTTTAAATC CTAA
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Protein sequence | MSSSHKLRQL LANPEIIVIP GIYDCLSAKL AENIGFDVVA TSGFGIAAST LGLPDYGFLT ATEALYSVGR IAQSVSVPLI ADLDTGYGNA LNVMRTIKDA VQLGVAGVLL EDQEWPKKCG HFEGKRVIPT SEHAGKIRAA VEARGDSGLV IIARTDARGP LGLEEAIARG HAYIEAGADI LFVEAPQSVA ELKAIASAFP HTPLVANIVE GGKTPPLSAS ELQDLGFKIV FFPLTGLLAV TQTLTACLSH IKEQGTTANF TDIVNFQDFQ ALVGVPQFLQ MEQKFKS
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