| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4740 |
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| Symbol | |
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| ID | 3679627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5946354 |
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| End bp | 5947187 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637720096 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_325232 |
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| Protein GI | 75910936 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.287591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0863508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCA GCCAAAATCT TTCCTCTACT AACACATATT CTCAGCCAAA CTTAGCTGAA
TCTGTTTCTT TAATCCAGCA TTTGATAAAT CAAGTGAAGG AAGCAATATT TTGTTTAGAT
TATCAAGGAC ACTTTTACTA CATTAATGAT GCTGCCTGTT CTTTATTAGG CCATTCTAGA
CAGAAATTAT TGAACATGAC CATTGATGAA GTAGAGATGG ATTTCCTCCC ATCAAGTTGG
TCATATTACT GGCAATTGCT TAAACAACAA ACTTCCTTAA CTTTTAAGAA GGTGTGTTCT
TCTCAACAAT ATCAATCCAT AGAAGTCACT ATTAAGTTTC TAGAACATGG AAGTGAACTT
TTAGGCTGTA TTTTAGCCCA TACATTCTCA ACAAATAATC CAGATATTGC CTGTGATCAA
GATTTATATC TGGAACAAGA AAATCAGCCT GTTAACTCAT CTAATAAGTC TTTGTCAAGT
GCTGACTTTT ATCCTAATTG TGTACAGCTT CGACCAATCT TTGAGTTTAT TGAGCAAAAC
TATCACTTAC CCATTAGTCT TAATGATGTT GCCCAAGCAG TCGGTTATTC TCCTGCATAT
TTAACTAATT TAGTTAAGCG TCGAACCCAA TTAACGATTA TTGATTGGAT TCTCGAAAGA
AAAATGCTAG AAGCTCGTTC ATTATTAATT AACAGCGACA AGTCAGTAAC AGAGATTGCT
ATGGCTGTTG GCTTCACAGA CGCTTATTAC TTTTCTCGTC GTTTTAGCCA ATATCATAAA
TTGTCACCCA GAAGTTGGAG ACAAAAATAT CACTATTTGC AAACAATAAA CTAA
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| Protein sequence | MFSSQNLSST NTYSQPNLAE SVSLIQHLIN QVKEAIFCLD YQGHFYYIND AACSLLGHSR
QKLLNMTIDE VEMDFLPSSW SYYWQLLKQQ TSLTFKKVCS SQQYQSIEVT IKFLEHGSEL
LGCILAHTFS TNNPDIACDQ DLYLEQENQP VNSSNKSLSS ADFYPNCVQL RPIFEFIEQN
YHLPISLNDV AQAVGYSPAY LTNLVKRRTQ LTIIDWILER KMLEARSLLI NSDKSVTEIA
MAVGFTDAYY FSRRFSQYHK LSPRSWRQKY HYLQTIN
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