Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4662 |
Symbol | |
ID | 3679818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5823573 |
End bp | 5824130 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637720018 |
Product | endoribonuclease L-PSP |
Protein accession | YP_325154 |
Protein GI | 75910858 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAC GTCTTACCCA TGCAGTAAAT TCACTAAGAA CAAAACTATC ACGACGAAAT ACGCTTTTGT GGCTTGGAGG TAGTGGACTA GGTACTGGTT TTGTTCTCGG AACACAGAAG GGAGTAATGG CTACATCCCA ACAGAAAAAA GATGTGCAAT TGGTGAACCC ACCAACCTTA TATGATGCAA CCCGAAATGG TTATAGTCAT ATAGCTGTGA CACCAGCAAA GTCGAGAACA GTCTATATTT CTGGTCAATT TGGTTCGGAT TTGCAAGGAA ATCTTGTCTC CCCTGAGTTT GAACCACAGT TAATCAGGGC TTTTCAGAAC CTCCGCTTTG CCTTAGACGC AGTTGGTGCA AAACCCAGCG ATGTTGTCAA AACAACTGTA CTTATAGTTG ATCATACTCA AGATAAATTG ATTCCCTTAG GGAGACAAAT TCAAAATCTA TGGCCATTTC GACCACCAGC CAACACCCTC ATTCCTGTTC CTAGACTTGC ACTTGACGGG ATGTTATTTG AAATTGATGC TTATGCGGTG ATTCCAGAGA AAGATTAA
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Protein sequence | MTERLTHAVN SLRTKLSRRN TLLWLGGSGL GTGFVLGTQK GVMATSQQKK DVQLVNPPTL YDATRNGYSH IAVTPAKSRT VYISGQFGSD LQGNLVSPEF EPQLIRAFQN LRFALDAVGA KPSDVVKTTV LIVDHTQDKL IPLGRQIQNL WPFRPPANTL IPVPRLALDG MLFEIDAYAV IPEKD
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