Gene Ava_4662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4662 
Symbol 
ID3679818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5823573 
End bp5824130 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content42% 
IMG OID637720018 
Productendoribonuclease L-PSP 
Protein accessionYP_325154 
Protein GI75910858 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC GTCTTACCCA TGCAGTAAAT TCACTAAGAA CAAAACTATC ACGACGAAAT 
ACGCTTTTGT GGCTTGGAGG TAGTGGACTA GGTACTGGTT TTGTTCTCGG AACACAGAAG
GGAGTAATGG CTACATCCCA ACAGAAAAAA GATGTGCAAT TGGTGAACCC ACCAACCTTA
TATGATGCAA CCCGAAATGG TTATAGTCAT ATAGCTGTGA CACCAGCAAA GTCGAGAACA
GTCTATATTT CTGGTCAATT TGGTTCGGAT TTGCAAGGAA ATCTTGTCTC CCCTGAGTTT
GAACCACAGT TAATCAGGGC TTTTCAGAAC CTCCGCTTTG CCTTAGACGC AGTTGGTGCA
AAACCCAGCG ATGTTGTCAA AACAACTGTA CTTATAGTTG ATCATACTCA AGATAAATTG
ATTCCCTTAG GGAGACAAAT TCAAAATCTA TGGCCATTTC GACCACCAGC CAACACCCTC
ATTCCTGTTC CTAGACTTGC ACTTGACGGG ATGTTATTTG AAATTGATGC TTATGCGGTG
ATTCCAGAGA AAGATTAA
 
Protein sequence
MTERLTHAVN SLRTKLSRRN TLLWLGGSGL GTGFVLGTQK GVMATSQQKK DVQLVNPPTL 
YDATRNGYSH IAVTPAKSRT VYISGQFGSD LQGNLVSPEF EPQLIRAFQN LRFALDAVGA
KPSDVVKTTV LIVDHTQDKL IPLGRQIQNL WPFRPPANTL IPVPRLALDG MLFEIDAYAV
IPEKD