Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4601 |
Symbol | |
ID | 3679990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5755596 |
End bp | 5756768 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637719956 |
Product | NHL repeat-containing protein |
Protein accession | YP_325093 |
Protein GI | 75910797 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAACCAG AATTAACAAA AACTCCAGCA AATTTCCCCC TTTCACCTCC AGGGGCGGCG GTGATTTTAG GTGATATTCC TAACTCAGAA TTATTAGCGA TTCCCCTAGC GCCTACTCCT AGCACCATGT TCGGCCCCCG TGGTGCTTGT TTGGTGGCGG AAACAGGGGC GTTATGGGTG TCAGATACGG GACATCATCG GTTGTTGGGT TGGCGTAAGT TACCTACAAC AGATAGTCAA CCGGCTGACT GGGTAATTGG ACAACCAGAT TTTTATCATG AGGGACAAAA TGCTAAGGGT ACGCCAGGTA GGGCTACTGT GAGTGTACCG ACGGGGATTT GTGTCTGTGG TGGAGGTTTG GCAATTGCTG ATGCCTGGAA TCACCGGGTT TTGATTTGGC ACAAGATACC GGAAGATAAC AATGTGCCGG CGGATTTGGT GTTGGGACAA GGGAATTTTT CTGACAATGA ACCAAATCGG GGTAAGCAAT CACCAGATGC GAATACTATG CACTGGCCTT ACGGGGTTGC ATATCATCAA GGACGGCTAT TTGTGGCTGA CACTGGTAAT CGTCGGTTGT TGATTTGGCA GGAGTTACCA ACAGAAAATG GACAACCGGC TGATATAGTT TTGGGACAGC CGGATATGAT ATCTCGCAAT GAGAATGGTG GTGGTTCCCC CACGGCTGGG AGTATGCGTT GGTGTCATGA TATTGCCTTT TGGGATGATA ATTTAGTTGT CACCGATGCG GGTAATAATC GGGTGATGAT TTGGCAGGGG ATACCTACCG AAAATAATGT CCCCTGTGCG GTGGTGTTGG GGCAGAAAAG TTTTGATTTG GTGGAGATGA ACCAAGGGGT TTATTTTCCC AGTGCTGGTA GTTTAAGTAT GCCTTATGGG GTGGGGACGA CTGAGGATTG GTTGCTGGTG GCGGATACTG CTAATTCTCG GTTGCTAGGA TGGAGGAAAC GAGAGTCGAT ATTATTATTG CAGGGGGCGA TCGCTGATGG CATCATCGGC CAAAATTCTT TTCAAAGTAA AAGTGAAAAT CGGCATTTTG GGTTGCCTAC AAGGGATAGT TTGAATTGGT GTTATGGGGT AAAGGTTTGT GGTAGTACGG CGGTAATATC TGATTCTGGG AATAATCGGG TTTTGTTATG GCGCTTTTTG TAA
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Protein sequence | MQPELTKTPA NFPLSPPGAA VILGDIPNSE LLAIPLAPTP STMFGPRGAC LVAETGALWV SDTGHHRLLG WRKLPTTDSQ PADWVIGQPD FYHEGQNAKG TPGRATVSVP TGICVCGGGL AIADAWNHRV LIWHKIPEDN NVPADLVLGQ GNFSDNEPNR GKQSPDANTM HWPYGVAYHQ GRLFVADTGN RRLLIWQELP TENGQPADIV LGQPDMISRN ENGGGSPTAG SMRWCHDIAF WDDNLVVTDA GNNRVMIWQG IPTENNVPCA VVLGQKSFDL VEMNQGVYFP SAGSLSMPYG VGTTEDWLLV ADTANSRLLG WRKRESILLL QGAIADGIIG QNSFQSKSEN RHFGLPTRDS LNWCYGVKVC GSTAVISDSG NNRVLLWRFL
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