Gene Ava_4601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4601 
Symbol 
ID3679990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5755596 
End bp5756768 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content47% 
IMG OID637719956 
ProductNHL repeat-containing protein 
Protein accessionYP_325093 
Protein GI75910797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAACCAG AATTAACAAA AACTCCAGCA AATTTCCCCC TTTCACCTCC AGGGGCGGCG 
GTGATTTTAG GTGATATTCC TAACTCAGAA TTATTAGCGA TTCCCCTAGC GCCTACTCCT
AGCACCATGT TCGGCCCCCG TGGTGCTTGT TTGGTGGCGG AAACAGGGGC GTTATGGGTG
TCAGATACGG GACATCATCG GTTGTTGGGT TGGCGTAAGT TACCTACAAC AGATAGTCAA
CCGGCTGACT GGGTAATTGG ACAACCAGAT TTTTATCATG AGGGACAAAA TGCTAAGGGT
ACGCCAGGTA GGGCTACTGT GAGTGTACCG ACGGGGATTT GTGTCTGTGG TGGAGGTTTG
GCAATTGCTG ATGCCTGGAA TCACCGGGTT TTGATTTGGC ACAAGATACC GGAAGATAAC
AATGTGCCGG CGGATTTGGT GTTGGGACAA GGGAATTTTT CTGACAATGA ACCAAATCGG
GGTAAGCAAT CACCAGATGC GAATACTATG CACTGGCCTT ACGGGGTTGC ATATCATCAA
GGACGGCTAT TTGTGGCTGA CACTGGTAAT CGTCGGTTGT TGATTTGGCA GGAGTTACCA
ACAGAAAATG GACAACCGGC TGATATAGTT TTGGGACAGC CGGATATGAT ATCTCGCAAT
GAGAATGGTG GTGGTTCCCC CACGGCTGGG AGTATGCGTT GGTGTCATGA TATTGCCTTT
TGGGATGATA ATTTAGTTGT CACCGATGCG GGTAATAATC GGGTGATGAT TTGGCAGGGG
ATACCTACCG AAAATAATGT CCCCTGTGCG GTGGTGTTGG GGCAGAAAAG TTTTGATTTG
GTGGAGATGA ACCAAGGGGT TTATTTTCCC AGTGCTGGTA GTTTAAGTAT GCCTTATGGG
GTGGGGACGA CTGAGGATTG GTTGCTGGTG GCGGATACTG CTAATTCTCG GTTGCTAGGA
TGGAGGAAAC GAGAGTCGAT ATTATTATTG CAGGGGGCGA TCGCTGATGG CATCATCGGC
CAAAATTCTT TTCAAAGTAA AAGTGAAAAT CGGCATTTTG GGTTGCCTAC AAGGGATAGT
TTGAATTGGT GTTATGGGGT AAAGGTTTGT GGTAGTACGG CGGTAATATC TGATTCTGGG
AATAATCGGG TTTTGTTATG GCGCTTTTTG TAA
 
Protein sequence
MQPELTKTPA NFPLSPPGAA VILGDIPNSE LLAIPLAPTP STMFGPRGAC LVAETGALWV 
SDTGHHRLLG WRKLPTTDSQ PADWVIGQPD FYHEGQNAKG TPGRATVSVP TGICVCGGGL
AIADAWNHRV LIWHKIPEDN NVPADLVLGQ GNFSDNEPNR GKQSPDANTM HWPYGVAYHQ
GRLFVADTGN RRLLIWQELP TENGQPADIV LGQPDMISRN ENGGGSPTAG SMRWCHDIAF
WDDNLVVTDA GNNRVMIWQG IPTENNVPCA VVLGQKSFDL VEMNQGVYFP SAGSLSMPYG
VGTTEDWLLV ADTANSRLLG WRKRESILLL QGAIADGIIG QNSFQSKSEN RHFGLPTRDS
LNWCYGVKVC GSTAVISDSG NNRVLLWRFL