Gene Ava_4552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4552 
Symbol 
ID3680117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5704745 
End bp5705119 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content35% 
IMG OID637719908 
Productcupin region 
Protein accessionYP_325045 
Protein GI75910749 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACACA ATCATCAAAT TTTATCAACT ATGACTAACC AAACCATAAC TAACAAATCT 
CTTGTTATCC AACTACAAGA ACAAATTGAA TATCCCCGTA AAGGAATTAA AAGCCAAGTC
ATATTTCAAG ATACAGCTTG CCAATACACT CTGTTTTGTC TGGCAGCTAC AACAGAGATT
TCTGAGCATA CCTCTACTCG CAACGCCACT ATCAATGTTT TAGAAGGCAG AGGAATTTTG
AATTTATCAG GTCAAGATAT TACTCTCATT CCTGGTGTTT TTGTCTTGAT TCCTGCTAAT
GCACCTCATG CTCTAAAGTC TGAAGAAAAT CTAGCTTTTC TGCTCACACT TTCTGAAAAA
AATACAGATA AATAA
 
Protein sequence
MSHNHQILST MTNQTITNKS LVIQLQEQIE YPRKGIKSQV IFQDTACQYT LFCLAATTEI 
SEHTSTRNAT INVLEGRGIL NLSGQDITLI PGVFVLIPAN APHALKSEEN LAFLLTLSEK
NTDK