Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4552 |
Symbol | |
ID | 3680117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5704745 |
End bp | 5705119 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637719908 |
Product | cupin region |
Protein accession | YP_325045 |
Protein GI | 75910749 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACACA ATCATCAAAT TTTATCAACT ATGACTAACC AAACCATAAC TAACAAATCT CTTGTTATCC AACTACAAGA ACAAATTGAA TATCCCCGTA AAGGAATTAA AAGCCAAGTC ATATTTCAAG ATACAGCTTG CCAATACACT CTGTTTTGTC TGGCAGCTAC AACAGAGATT TCTGAGCATA CCTCTACTCG CAACGCCACT ATCAATGTTT TAGAAGGCAG AGGAATTTTG AATTTATCAG GTCAAGATAT TACTCTCATT CCTGGTGTTT TTGTCTTGAT TCCTGCTAAT GCACCTCATG CTCTAAAGTC TGAAGAAAAT CTAGCTTTTC TGCTCACACT TTCTGAAAAA AATACAGATA AATAA
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Protein sequence | MSHNHQILST MTNQTITNKS LVIQLQEQIE YPRKGIKSQV IFQDTACQYT LFCLAATTEI SEHTSTRNAT INVLEGRGIL NLSGQDITLI PGVFVLIPAN APHALKSEEN LAFLLTLSEK NTDK
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