| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4503 |
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| Symbol | |
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| ID | 3680204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5638461 |
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| End bp | 5643854 |
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| Gene Length | 5394 bp |
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| Protein Length | 1797 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637719859 |
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| Product | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor |
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| Protein accession | YP_324996 |
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| Protein GI | 75910700 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.194827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.137244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAA CCGTAGATAC AACTGTTTTA CTGTCTGGAT ATCAGTTGAT TGAGCAGCTT
TATCACGGTT CTAAAACTCT TGTTTATCGT GGAATACGGC GAAAAGAAAG TGTAGCGCAA
CCTGTGGTGA TTAAGCTGTT GCAACGCGAT TATCCTAGCT TTAGTGAACT ATTACAGTTT
CGCAATCAAT ACACCATCGC CAAAAATTTA AATATTCCTG GTGTTGTTCG CCCTACTTCT
CTAGAACCCT ATGGCAACAG CTACGCTTTG GTCATGGAAG ATTTTGGTGG GGTATCATTG
GGAACATATA GTCAAACCCA CTCTTTGTCT TTGGTGGATG TATTAGCGAT CGCGCTGCAA
CTAGCCGATA TTCTCCATGA GCTTTATCAG CATCGGGTAA TTCATAAGGA CATTAAACCC
GCTAATATCC TAATTCATCC AGAATCGCAA CAAGTCAAAC TCATTGATTT TAGTATCGCT
TCCCTATTAC CGAAAGAAAA CGAAGAAATC AAGCACCCCA ATGTCTTAGA AGGCACATTA
GCTTATATTG CACCAGAGCA AACCGGGCGG ATGAATCGGG GCGTTGACTA CCGTACAGAC
TTTTATAGTC TAGGTGTGAC GTTGTTTGAA TTGTTAACAG GACAGTTACC TTTTGCTGGT
AACGATCCTT TAGAACTGGT GCATTGTCAC ATTGCCAAAC CTGCACCCAG GATAGATGAA
ATTAACTCAG AAATACCAGA AGCGATCGCG CAAATTGTCG CTAAGTTAAT GAGCAAAAAT
GCCGAAGACC GCTACCAAAG TGCTTTAGGC TTAAAGCATG ATTTGGCAAT TTGTTTAGAA
CAGTTAAACC AAACAGGCCA GATTGAACAG TTTATCATTG GGCAACGGGA TATTTGCGAT
CGCTTCACCA TCCCGGAAAA ACTCTATGGA CGAGAAACAG AAGTTCAGAC ACTCTTAGAT
GCTTTTGCGC GAGTCAGCAA CGGTACCTCA GAATTACTGC TAGTAGCTGG TTTCTCTGGG
ATTGGGAAGA CGGCGGTGGT GAATGAAGTT CATAAACCAA TCGTCCGGCA ACGGGGCTAT
TTTATTAAAG GTAAATTTGA CCAGTATAAT CGTAATATCC CCTTCTCTGC TTTTGTCCAA
GCCTTTCGAG ATTTAATGGG ACAGCTGCTT TCAGAATCGG ATATCCAACT AAAAGCATGG
AAAGCCAGTA TTCTTGAGGC TTTGGGAGAT CATGCCCATG TAATTATTGA TGTCATCCCG
GAATTGGAAT GTATTCTTGG TATACAACCA CCTGTAGCAG AACTATCGGG TACGGCGGCG
CAGAATCGGT TTAATTTGTT GTTCCAGAAA TTTACTCAAG TTTTTACAAC AAAAGAACAT
CCCTTGGTGA TGTTTTTGGA TGACTTGCAA TGGGCGGATT CTGCATCTTT AAAATTGATG
CAGTTGTTGA TGAGTGAGAG GGAACAGGGG TATTTGCTGC TAATTGGGGC TTATCGGGAT
AACGAAGTAT TTCCTGGCCA TCCGTTAATG CTGACTTTAA ATGAAGTCAG CAAAGTAGGA
GCTACAATCA ACAGAATTAC CTTAGCATCT TTGAGTAGAA CCAGCCTGAA TCAGTTAGTT
GCAGATATGC TCAAATGTGC TGAGGTATTG GCGCAACCTC TAGCAGGATT AGTCTATCAA
AAAACCCAGG GGAATCCCTT TTTTGCCACG CAATTTCTTA AAACTCTGCA TCAAGAGCAA
TTCATCACCT TTAATATCCA AGCGGGACAT TGGCAATGTG ATATTACTCA GATACGCAAG
GCGGCATTAA CCGATGATGT GGTGGAGTTC ATGGCCAAGC AGTTGCAAAA ATTACCTGAT
GAGACTCAAA ATATCCTGAA ACTAGCAGCC TGTATTGGTA ATCAATTTGA CTTGAATACT
CTGGCGATCG TTTCGGAGCA ATTGCCGCAA CAGGTGGCAT CTGACTTGTG GAAAGGGTTA
CAGGAAGGAT TAATTTTACC CATCAGTGAA ACCTACAAGT TTTTTCAAGA TAATAATTTA
AATGATACCA ATACTGATGG GATTAGCGTT ACTTACAAAT TCCTCCACGA TCGCGTCCAG
CAAGCTGCTT ATTCCCTGAT TCCCCAGGAA GAGAAACAGG TTGTGCATCT GACAATTGGT
CGTCACTTAT TGAACCATAC ATCAGCCGAA CAATTAGAGG AGCAAATTTT TGATATCGTC
AACCAATTGA ATATCGGCTG TACGCTCATC AGTGATACCC TAGAGCAAGC AAGGCTGGTA
GAGCTAAATT TAAGAGCAGG ACGGAAAGCG ATCGCCACTA CTGCCTATGA TACTGCCACC
TATTGCTTAA AATATGCCTG TAATTTGCTG CCGACTGATA GCTGGCAAAC TCAGTATGAT
TTGGCATTAG CTTGCTATAG TAGCGCGGCT GAAGCTGCTT ATCTGAATAC AGATTTGGTG
CAGATGGAAA CTTTGGCGGA AATTGTTTTG CAACAAGCGC GGAGTTTGTT AGATGCTGCC
AAGGTGTATG AAATTAAAAT CGATGCTTAC ACTAGCCTTG GTGAATTTAG CAAAGCTTTA
ACCACGGGTT TAAACTTTCT CCAATCTTTT GGGATTGAAT TTCCCACTCA GCCTAATAAA
CAAGATTTTG CCGATTTTCT CCGGCAAACC CGACAGCAAT TGGCAGGGCG TTCTCCAGAT
GAACTGTTAA ACTTACCTGT GATGACTTCG CCCCAGTATC AAGCACTGCT GCGAATGTTA
GTCCAGATTA GTGGAGCTAC TTACTTAGCA TCTCCAGCCC TGTATCCTTT GATTTGCTTT
CAGCAGGTAC AGCTATCAGT CGCCCACGGC AATATTCCCG CCTCCAGCTT TGGATATGTG
GTTTATGGAC TAATACTTTG TGGTGTAGTT GGTGATATCA AAACAGGTTA TGAATTTGGT
CAACTGGCTT TACAGTTAGT AGATAAATTC AATAATCAGG AATATGCTGC TAAAGTCTTA
TACATAACCA GCAAGTTTAC TGTTCACTGG GTGAAAAATG CGGCGACAAC TCTCCAGCCA
TTACAAGAAG CCTATACCCT GGGACTAAAA GTCGGCGCTC TTACTTATGC TGGCTATTCT
GGTTATACCT ACGCCTTTCA TGCTTATTTT GTCGGTAAAG AACTTACAGC TTTAGAAACA
GAATGTCAGG CTTACAGCAT CGGCTTGGCA AACATCGAAC AACAAGCATT CTTAGGCTAC
CTGCATATCG TCCACCAAAC CGTTGCCAAT CTCTTAGGAA AATGTGAAAA CCCAACTAAA
TTAGTAGGCA CAATTTTTGA TGAAGGGGTA ACTTTAGCAA ATCTGGAAAA AGCCAACGAC
AAAACGGGGT TATGGCATTT CCATCTGTGC AAAGTAACTT TAACCTATTT ATTCGAGTGC
CATGATCAGA CACTTGATCA TTGCCAACAA GCAAAGCTGA ATGCTGGCGG CGGTAGTGGG
ATGCTGAACG TGCCAATACT GTATTTTTAT AGAGCTTTAG CCTGTTTCAC TCAGTTATCG
GCACATTCTC AGACAGATGA ATTATGGGCA TTAATTGCGG ATGCTCAAGA AAAGCTGCAA
AATTGGGCTA TCTATGCACC CATGAATTGT CAGCACCGAT ATGATTTGAT TTGTGCTGAA
GAACAGCGTG TTTTAGGACA TCCACAACAA GCCATAGATT TCTACGATCG CGCTATTTCT
CTAGCCCAAG AAAATGGCTA CATTGCAGAA CAAGCGATCG CTAATGAACT TACTGCCAAA
TTCTACCTTG GTTGGGGCAA AGAAAAAATT GCTGCTGTCT ATATGCAGGA AGCTTACTAT
TGCTATGCTC GTTGGGGAGC GAAAGCTAAA ACTAATCACC TAGAACATCG CTATCCCCAT
TTGCTGCGTC CGATTCTTCA GTCAGTTTCC CAACCCTTGA ACGTGTGGGA AAGCTTGACA
AGCACAATTA CACCAGATAT TTCCCTTCAT ACCTCACACT CTAGCTTGGG TAATAGCACA
AACATCAATA ACGCTATCGA TATTGCAAGT ATGATCAAGG CTTCTCAAAG TCTATCTGCT
ACTCTGCAAC TCGATGAGTT ACTACATCAA CTCACCCATA TTATTCTCCA AAACTCCGGG
GGCGATCGCT GTGCTTTAAT CTGTCCTAAT TCCGAGGGTG AATGGCAAGT TGTCGCTATA
GCTACACCCG AAACCACACA ACTTTGTTCA GAACTACTCG ATGGTAATCC GAATCTACCT
GTGAAATTGA TTCAGTATGT CAAAAACACG CAACAAATCG TGATGATTGA CAATCTCAAA
ACGGATTTAC CTGTTACAGA TGAATATCTG ATTCGTCAAC AACCAAAGAG TTTGTTATGC
TTGCCAATTA TTAGCCACGG GCAATTAATT GGGATTGTAT CTTTAAAAAA TCGCTCCACC
AGTGGAGTAT TTACTAGCGA TCGCATTTTC TTGCTTAACT TTCTCTGCAC TCAGGCGGCT
ATCTCTTTAG AAAATGCCCG ACTTTATCAA AAAGCACAAA CCTACGCCCA AAAACTAGAA
CAATCACAAC TGCAAATAGT CCAGAGTGAA AAAATGGCTT CCTTGGGTAA CTTAGTCGCC
GGTGTCGCCC ACGAAATCAA CAACCCCATC GGCTTTCTTA ATGGCAGTAT TAGCAATGCC
CAAGAATATG TCCAGGATTT ACTCGACTAT ATCGCCCTAT ATCAACAATA TCATCCCAAA
GCCGCCGCAC CTGTCAAGAC AAAGGCAAAA AACATTGATT TAGAATATCT CTGTGAGGAT
TTACCAAAGT TGCTTAATTC TATGCAGGGT GCAAGCGATC GCATTCAATC TATCAGTACC
AGCCTGCGTA CCTTTTCTCG TGCTGATAGT GAGTATAAAG TCATGGCTAA CCTGCACGAA
GGCATTGACA GCACACTGTT AATCTTGAAA TATCGCCTCA AAGCTAATGA GTATCGCCCT
GCAATTCCAG TAATTACGGA ATACAGTGAG TTACCAGCTA TTAAATGTTT CCCAGGGCAA
TTAAATCAAG TATTTATGAA CATCCTGGCT AATGCCATTG ATATGTTTGA TGAGATGGCA
AAATCTCAAT CTTATAAAGA AATAGAAGCC CATCCTCAAA AAATCACGAT TCGCACAACA
ATGGAGGCAA ATCAAGTTAT CATCTCGATT GCAGATAATG GTAAGGGTAT GAGCGAAGAT
GTGAAAGTGA GAATCTTCGA CCATTTATTT ACTACTAAAG GTGTGGGCAA AGGTACAGGT
TTAGGATTGG CGATCGCTCG GCAAATTGTG GTAGAAAAAC ATGGCGGTAG CTTAGAAGTA
CAATCTCAAT TAGGTAAAGG CAGTGATTTT TGCATTCAAC TGCCATTGTT GTAA
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| Protein sequence | MSATVDTTVL LSGYQLIEQL YHGSKTLVYR GIRRKESVAQ PVVIKLLQRD YPSFSELLQF
RNQYTIAKNL NIPGVVRPTS LEPYGNSYAL VMEDFGGVSL GTYSQTHSLS LVDVLAIALQ
LADILHELYQ HRVIHKDIKP ANILIHPESQ QVKLIDFSIA SLLPKENEEI KHPNVLEGTL
AYIAPEQTGR MNRGVDYRTD FYSLGVTLFE LLTGQLPFAG NDPLELVHCH IAKPAPRIDE
INSEIPEAIA QIVAKLMSKN AEDRYQSALG LKHDLAICLE QLNQTGQIEQ FIIGQRDICD
RFTIPEKLYG RETEVQTLLD AFARVSNGTS ELLLVAGFSG IGKTAVVNEV HKPIVRQRGY
FIKGKFDQYN RNIPFSAFVQ AFRDLMGQLL SESDIQLKAW KASILEALGD HAHVIIDVIP
ELECILGIQP PVAELSGTAA QNRFNLLFQK FTQVFTTKEH PLVMFLDDLQ WADSASLKLM
QLLMSEREQG YLLLIGAYRD NEVFPGHPLM LTLNEVSKVG ATINRITLAS LSRTSLNQLV
ADMLKCAEVL AQPLAGLVYQ KTQGNPFFAT QFLKTLHQEQ FITFNIQAGH WQCDITQIRK
AALTDDVVEF MAKQLQKLPD ETQNILKLAA CIGNQFDLNT LAIVSEQLPQ QVASDLWKGL
QEGLILPISE TYKFFQDNNL NDTNTDGISV TYKFLHDRVQ QAAYSLIPQE EKQVVHLTIG
RHLLNHTSAE QLEEQIFDIV NQLNIGCTLI SDTLEQARLV ELNLRAGRKA IATTAYDTAT
YCLKYACNLL PTDSWQTQYD LALACYSSAA EAAYLNTDLV QMETLAEIVL QQARSLLDAA
KVYEIKIDAY TSLGEFSKAL TTGLNFLQSF GIEFPTQPNK QDFADFLRQT RQQLAGRSPD
ELLNLPVMTS PQYQALLRML VQISGATYLA SPALYPLICF QQVQLSVAHG NIPASSFGYV
VYGLILCGVV GDIKTGYEFG QLALQLVDKF NNQEYAAKVL YITSKFTVHW VKNAATTLQP
LQEAYTLGLK VGALTYAGYS GYTYAFHAYF VGKELTALET ECQAYSIGLA NIEQQAFLGY
LHIVHQTVAN LLGKCENPTK LVGTIFDEGV TLANLEKAND KTGLWHFHLC KVTLTYLFEC
HDQTLDHCQQ AKLNAGGGSG MLNVPILYFY RALACFTQLS AHSQTDELWA LIADAQEKLQ
NWAIYAPMNC QHRYDLICAE EQRVLGHPQQ AIDFYDRAIS LAQENGYIAE QAIANELTAK
FYLGWGKEKI AAVYMQEAYY CYARWGAKAK TNHLEHRYPH LLRPILQSVS QPLNVWESLT
STITPDISLH TSHSSLGNST NINNAIDIAS MIKASQSLSA TLQLDELLHQ LTHIILQNSG
GDRCALICPN SEGEWQVVAI ATPETTQLCS ELLDGNPNLP VKLIQYVKNT QQIVMIDNLK
TDLPVTDEYL IRQQPKSLLC LPIISHGQLI GIVSLKNRST SGVFTSDRIF LLNFLCTQAA
ISLENARLYQ KAQTYAQKLE QSQLQIVQSE KMASLGNLVA GVAHEINNPI GFLNGSISNA
QEYVQDLLDY IALYQQYHPK AAAPVKTKAK NIDLEYLCED LPKLLNSMQG ASDRIQSIST
SLRTFSRADS EYKVMANLHE GIDSTLLILK YRLKANEYRP AIPVITEYSE LPAIKCFPGQ
LNQVFMNILA NAIDMFDEMA KSQSYKEIEA HPQKITIRTT MEANQVIISI ADNGKGMSED
VKVRIFDHLF TTKGVGKGTG LGLAIARQIV VEKHGGSLEV QSQLGKGSDF CIQLPLL
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