Gene Ava_4456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4456 
Symbol 
ID3680391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5580419 
End bp5581027 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content43% 
IMG OID637719811 
Productcyclase/dehydrase 
Protein accessionYP_324949 
Protein GI75910653 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC ACCATATTCT GAAAGTGACT AAACAATACA ACCCTACAGA AGACTTGGAA 
TTTAACCCCG ATTTAGATGG TGAATTGGTT GCAGGTGCAG ACAACCTACC ATCTGTAGAA
ATCCAAGTTG AGAAAATCGC CGACCGACAA CGGCAAATTA CGGCTAGAGT CCAAATCCCC
CAACCAGTGG AACAAGTTTG GCAGGTACTC ACAAATTATG AAGCCTTAGC TGACTTCATT
CCTAACCTCG CTAAAAGTTC CCTACTTGAG CATCCTAATG GTGGTATCCG ACTGGAACAA
GTAGGCTCTC AGCGCTTACT CAATTTCAAA TTTTGCGCCC GTGTAGTTCT AGATTTGGAG
GAATACTTCC CCAAGGAAAT AAATTTCCAA ATGGTTGAGG GAGATTTTAA AGGCTTTTCT
GGTAATTGGT GTTTACAACC CTATGCGCTC GGTGATGTAA TTGGTACTGA CCTATGTTAC
ACAATCCAAG TTTGGCCTAA GTTGACGATG CCAATCACTA TTATTGAGCG TCGTCTGAGT
CAGGATCTTA GGTCTAACCT GTTGGCAATT TACCAAAGGG TAGAGTGTTT GGCTAACCAG
AGTCTCTAG
 
Protein sequence
MKAHHILKVT KQYNPTEDLE FNPDLDGELV AGADNLPSVE IQVEKIADRQ RQITARVQIP 
QPVEQVWQVL TNYEALADFI PNLAKSSLLE HPNGGIRLEQ VGSQRLLNFK FCARVVLDLE
EYFPKEINFQ MVEGDFKGFS GNWCLQPYAL GDVIGTDLCY TIQVWPKLTM PITIIERRLS
QDLRSNLLAI YQRVECLANQ SL