Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4445 |
Symbol | |
ID | 3680438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5567468 |
End bp | 5570020 |
Gene Length | 2553 bp |
Protein Length | 850 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637719799 |
Product | hypothetical protein |
Protein accession | YP_324938 |
Protein GI | 75910642 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.179698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAT CTCGAACATC AGCCTTTTGG AATTATGTAG CTGAATGTGT CCGCCTCCTA TACTGGTCTT GCTTTAAGCC TTACACCTTT GAACGCTGGC TACGCGATAT CCATCCAGAA CTAAAGCCAC AAGATAACCC ATTTACCAAA AGGATTGAGT TTTCGACCAA CCCGCATTTG CGTCGCTATG CTGAGCAAGT TAGCTGGCTA ATTGCTGTAG TTCCCATATT TGCTGTGTTG CTAGCCGCAC CAATCTATAC TTTGGTTACT GGTCAGTCAT TTGACTGGTT AATAAGCTGT AATTTTTGTC TGGGTTGGTT TTTAGGACGG TTTACAAGAA ATCTTCTGGA ATGTAGTGAT AAAGAAAAAT TAGTAATTTG GCTTTTTATA ATTTTTATAT TTATTTGGAT ACTGAAGTTT TTACCAGGCA TGGCATTAAG TGCGAAGTTG AGCTTGGTAT CTAGTGTAGC GTTAGGTATG ACCTTAAATA TACTGATAAT TTTATTGATT GGCGTGGCAT TTAGCTTGTT TATAGGTATG CCAATTGGTA TTTTGTTGGG CTTAGATTTT AGCGTAGCAC TTCTTAAAAA GAGAGTACAT AAAGAAGAAA TAGCAAGCAA AATAAGTAAA ACGTTAGGTG CAGTGGTAAG TATATCGATA GGTGTGTTCG TAGGCTTATT AACAAGTATA ATGTCATGCT TGGTATTAGG TATAGCAATT GGCAAGAAAC AAGGTGTAGA GTGGAGTGTA TTAATTAGTA TTAATGTACT TGTTATTTCT GTATTTAGCA GTCTATTACG CGTTTGCTTA TGGTTGCCGG AATTATTGTG GATATTTCTC CTATTTTTGT ACTCTAAAAT AGATATTTTA TTCTCAATGA CTGAGGAAAA AAACCTCAGC ATCGACTTTC TGGATGATGA AGTACCTAAT TTTTATCAAA TTAAAACGCA AGCAAAATAT TTAAGTTATC TACCCCATCG TTTTGATGAA TTAATTATTT TACCTCTACC TTTCTTGGAG CAGATGATTG CCGAGGCTTA CCAAGATAAC TCTCTGACTG CGCTTGAGAC AATAGATTAC CTGATCACTT CCACAAATCA GCAAAAAGTA GCAGTACAGG CAATGCTAAC TATTGCTGCT GATATTTTCA ATAGTTGTCA AAGGTTAGAA GATATTGTAG ACATTGCTAA TCAATTAACT TGGGTTCCTT CACCACTACC AAAAGAACTT GGCTTTGTTC TACCGCCATT TTTAGATATT AGCCAAAGTG TCAGGGCATC ACAACAAGCA ACTACATTCT ATCGCCGATA TGAATTACTC AACCCTCCCA TCAGCGCCTT AAACGAACTG AAAAACACAC TAGCTTTTGG TAAAAATGCT TCATTAGCTA CCAAGTTTGG CAGCATAAGC GATCGCTGGT TAACCATTTT ACAGTTAGCA CAACGTACCT TAGAGGAAAC AGCAAGACAA TCACAAGAAA TTCGCCAAGT TTATATCGCT GGTAATTCAC TAGATCCAGA AACAGCCAAG TATCGTTTTA AAGGGCGAAT TGACATCTTT CGAGAAATCG AAACCTTGAC ACTTTCTGAC CAACCGCCAG TTTTGTTACT ATACGGTGGA CGAAGAACTG GCAAAACTTC CGCACTGAAA TATTTACCTT ATAAAGTCAC TTCAGATATC ATACCTTTGC TGATAGATGT ACAAGGTGCA GCATCAGCCA CCACCATCAA AGGATTCACC GAAAATCTAG CCCAACAAAT TATCGATACT GCACGACGCT TACCCCGCAA ACTACACTTA CCAAATCCAG ATAGCAGCAA GCTGAATGAA GATCCTTTTC CCGCACTGCA AACTTGGTTA GCAGAAATAG AACGCAGTCA TTCTGGTAAA CGATTTCTTC TCTGTTTAGA TGAATTTGAA CGCTTGAGTG AAGTAGTCAA CGCCACAAAT AGCCGTGCGC CACTCAACTT TATTCGTCAC CTACTGCAAC ATCAAAAACA ATGGATTTTG CTGTTCAGTG GTTCTCACCT ATTATCTGAA CTTGATGCTT ACTGGAGCGA TTATTTAATT AACACTCGCG CCTTGCGAAT GACTTATCTG CAAGAATCAG AAGTCCGTGA ATTAATTCTC AAGCCAGTAG AAGATTTTAC TAATATTTAC GAGCCAGAGG CAGTAGATAA GATTATCCAA ATTACTTGCT GTCAGCCTTA CCTTGTGCAG TTGGTGTGTT ACGAGTTGGT AGAATTGCTA AATCGTGATA TTAGGGCAAA CAGGCGACAA CCAAATACGG CAAAAGCCAC AGTCGCGGAT GTGCAAGATA TTATCCCCAT CGTTCTAGAA CGAGGTGATC AATATTTTCG GGAATTATGG ACAAGTTTAG AAGAAAGCGA TCGCAATTTA CTGCGTCGTC TCATTGATGG CGAAACTCCC ACACCACAAG ACAGCAAGAT AGTCAAAAAG CTATCACGCA AGGAAATCTT GACTCCAGAA GGTAATACTT TTCAAGTGCC TTTAGTAGAG AGATTTGTCG AATATCTGCT AGAAGAAGAA TAA
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Protein sequence | MSKSRTSAFW NYVAECVRLL YWSCFKPYTF ERWLRDIHPE LKPQDNPFTK RIEFSTNPHL RRYAEQVSWL IAVVPIFAVL LAAPIYTLVT GQSFDWLISC NFCLGWFLGR FTRNLLECSD KEKLVIWLFI IFIFIWILKF LPGMALSAKL SLVSSVALGM TLNILIILLI GVAFSLFIGM PIGILLGLDF SVALLKKRVH KEEIASKISK TLGAVVSISI GVFVGLLTSI MSCLVLGIAI GKKQGVEWSV LISINVLVIS VFSSLLRVCL WLPELLWIFL LFLYSKIDIL FSMTEEKNLS IDFLDDEVPN FYQIKTQAKY LSYLPHRFDE LIILPLPFLE QMIAEAYQDN SLTALETIDY LITSTNQQKV AVQAMLTIAA DIFNSCQRLE DIVDIANQLT WVPSPLPKEL GFVLPPFLDI SQSVRASQQA TTFYRRYELL NPPISALNEL KNTLAFGKNA SLATKFGSIS DRWLTILQLA QRTLEETARQ SQEIRQVYIA GNSLDPETAK YRFKGRIDIF REIETLTLSD QPPVLLLYGG RRTGKTSALK YLPYKVTSDI IPLLIDVQGA ASATTIKGFT ENLAQQIIDT ARRLPRKLHL PNPDSSKLNE DPFPALQTWL AEIERSHSGK RFLLCLDEFE RLSEVVNATN SRAPLNFIRH LLQHQKQWIL LFSGSHLLSE LDAYWSDYLI NTRALRMTYL QESEVRELIL KPVEDFTNIY EPEAVDKIIQ ITCCQPYLVQ LVCYELVELL NRDIRANRRQ PNTAKATVAD VQDIIPIVLE RGDQYFRELW TSLEESDRNL LRRLIDGETP TPQDSKIVKK LSRKEILTPE GNTFQVPLVE RFVEYLLEEE
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