Gene Ava_4445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4445 
Symbol 
ID3680438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5567468 
End bp5570020 
Gene Length2553 bp 
Protein Length850 aa 
Translation table11 
GC content39% 
IMG OID637719799 
Producthypothetical protein 
Protein accessionYP_324938 
Protein GI75910642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.179698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAT CTCGAACATC AGCCTTTTGG AATTATGTAG CTGAATGTGT CCGCCTCCTA 
TACTGGTCTT GCTTTAAGCC TTACACCTTT GAACGCTGGC TACGCGATAT CCATCCAGAA
CTAAAGCCAC AAGATAACCC ATTTACCAAA AGGATTGAGT TTTCGACCAA CCCGCATTTG
CGTCGCTATG CTGAGCAAGT TAGCTGGCTA ATTGCTGTAG TTCCCATATT TGCTGTGTTG
CTAGCCGCAC CAATCTATAC TTTGGTTACT GGTCAGTCAT TTGACTGGTT AATAAGCTGT
AATTTTTGTC TGGGTTGGTT TTTAGGACGG TTTACAAGAA ATCTTCTGGA ATGTAGTGAT
AAAGAAAAAT TAGTAATTTG GCTTTTTATA ATTTTTATAT TTATTTGGAT ACTGAAGTTT
TTACCAGGCA TGGCATTAAG TGCGAAGTTG AGCTTGGTAT CTAGTGTAGC GTTAGGTATG
ACCTTAAATA TACTGATAAT TTTATTGATT GGCGTGGCAT TTAGCTTGTT TATAGGTATG
CCAATTGGTA TTTTGTTGGG CTTAGATTTT AGCGTAGCAC TTCTTAAAAA GAGAGTACAT
AAAGAAGAAA TAGCAAGCAA AATAAGTAAA ACGTTAGGTG CAGTGGTAAG TATATCGATA
GGTGTGTTCG TAGGCTTATT AACAAGTATA ATGTCATGCT TGGTATTAGG TATAGCAATT
GGCAAGAAAC AAGGTGTAGA GTGGAGTGTA TTAATTAGTA TTAATGTACT TGTTATTTCT
GTATTTAGCA GTCTATTACG CGTTTGCTTA TGGTTGCCGG AATTATTGTG GATATTTCTC
CTATTTTTGT ACTCTAAAAT AGATATTTTA TTCTCAATGA CTGAGGAAAA AAACCTCAGC
ATCGACTTTC TGGATGATGA AGTACCTAAT TTTTATCAAA TTAAAACGCA AGCAAAATAT
TTAAGTTATC TACCCCATCG TTTTGATGAA TTAATTATTT TACCTCTACC TTTCTTGGAG
CAGATGATTG CCGAGGCTTA CCAAGATAAC TCTCTGACTG CGCTTGAGAC AATAGATTAC
CTGATCACTT CCACAAATCA GCAAAAAGTA GCAGTACAGG CAATGCTAAC TATTGCTGCT
GATATTTTCA ATAGTTGTCA AAGGTTAGAA GATATTGTAG ACATTGCTAA TCAATTAACT
TGGGTTCCTT CACCACTACC AAAAGAACTT GGCTTTGTTC TACCGCCATT TTTAGATATT
AGCCAAAGTG TCAGGGCATC ACAACAAGCA ACTACATTCT ATCGCCGATA TGAATTACTC
AACCCTCCCA TCAGCGCCTT AAACGAACTG AAAAACACAC TAGCTTTTGG TAAAAATGCT
TCATTAGCTA CCAAGTTTGG CAGCATAAGC GATCGCTGGT TAACCATTTT ACAGTTAGCA
CAACGTACCT TAGAGGAAAC AGCAAGACAA TCACAAGAAA TTCGCCAAGT TTATATCGCT
GGTAATTCAC TAGATCCAGA AACAGCCAAG TATCGTTTTA AAGGGCGAAT TGACATCTTT
CGAGAAATCG AAACCTTGAC ACTTTCTGAC CAACCGCCAG TTTTGTTACT ATACGGTGGA
CGAAGAACTG GCAAAACTTC CGCACTGAAA TATTTACCTT ATAAAGTCAC TTCAGATATC
ATACCTTTGC TGATAGATGT ACAAGGTGCA GCATCAGCCA CCACCATCAA AGGATTCACC
GAAAATCTAG CCCAACAAAT TATCGATACT GCACGACGCT TACCCCGCAA ACTACACTTA
CCAAATCCAG ATAGCAGCAA GCTGAATGAA GATCCTTTTC CCGCACTGCA AACTTGGTTA
GCAGAAATAG AACGCAGTCA TTCTGGTAAA CGATTTCTTC TCTGTTTAGA TGAATTTGAA
CGCTTGAGTG AAGTAGTCAA CGCCACAAAT AGCCGTGCGC CACTCAACTT TATTCGTCAC
CTACTGCAAC ATCAAAAACA ATGGATTTTG CTGTTCAGTG GTTCTCACCT ATTATCTGAA
CTTGATGCTT ACTGGAGCGA TTATTTAATT AACACTCGCG CCTTGCGAAT GACTTATCTG
CAAGAATCAG AAGTCCGTGA ATTAATTCTC AAGCCAGTAG AAGATTTTAC TAATATTTAC
GAGCCAGAGG CAGTAGATAA GATTATCCAA ATTACTTGCT GTCAGCCTTA CCTTGTGCAG
TTGGTGTGTT ACGAGTTGGT AGAATTGCTA AATCGTGATA TTAGGGCAAA CAGGCGACAA
CCAAATACGG CAAAAGCCAC AGTCGCGGAT GTGCAAGATA TTATCCCCAT CGTTCTAGAA
CGAGGTGATC AATATTTTCG GGAATTATGG ACAAGTTTAG AAGAAAGCGA TCGCAATTTA
CTGCGTCGTC TCATTGATGG CGAAACTCCC ACACCACAAG ACAGCAAGAT AGTCAAAAAG
CTATCACGCA AGGAAATCTT GACTCCAGAA GGTAATACTT TTCAAGTGCC TTTAGTAGAG
AGATTTGTCG AATATCTGCT AGAAGAAGAA TAA
 
Protein sequence
MSKSRTSAFW NYVAECVRLL YWSCFKPYTF ERWLRDIHPE LKPQDNPFTK RIEFSTNPHL 
RRYAEQVSWL IAVVPIFAVL LAAPIYTLVT GQSFDWLISC NFCLGWFLGR FTRNLLECSD
KEKLVIWLFI IFIFIWILKF LPGMALSAKL SLVSSVALGM TLNILIILLI GVAFSLFIGM
PIGILLGLDF SVALLKKRVH KEEIASKISK TLGAVVSISI GVFVGLLTSI MSCLVLGIAI
GKKQGVEWSV LISINVLVIS VFSSLLRVCL WLPELLWIFL LFLYSKIDIL FSMTEEKNLS
IDFLDDEVPN FYQIKTQAKY LSYLPHRFDE LIILPLPFLE QMIAEAYQDN SLTALETIDY
LITSTNQQKV AVQAMLTIAA DIFNSCQRLE DIVDIANQLT WVPSPLPKEL GFVLPPFLDI
SQSVRASQQA TTFYRRYELL NPPISALNEL KNTLAFGKNA SLATKFGSIS DRWLTILQLA
QRTLEETARQ SQEIRQVYIA GNSLDPETAK YRFKGRIDIF REIETLTLSD QPPVLLLYGG
RRTGKTSALK YLPYKVTSDI IPLLIDVQGA ASATTIKGFT ENLAQQIIDT ARRLPRKLHL
PNPDSSKLNE DPFPALQTWL AEIERSHSGK RFLLCLDEFE RLSEVVNATN SRAPLNFIRH
LLQHQKQWIL LFSGSHLLSE LDAYWSDYLI NTRALRMTYL QESEVRELIL KPVEDFTNIY
EPEAVDKIIQ ITCCQPYLVQ LVCYELVELL NRDIRANRRQ PNTAKATVAD VQDIIPIVLE
RGDQYFRELW TSLEESDRNL LRRLIDGETP TPQDSKIVKK LSRKEILTPE GNTFQVPLVE
RFVEYLLEEE