Gene Ava_4442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4442 
Symbol 
ID3680435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5564313 
End bp5564906 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content43% 
IMG OID637719796 
Producthypothetical protein 
Protein accessionYP_324935 
Protein GI75910639 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3703] Uncharacterized protein involved in cation transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0834958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATC AAAGTACGCA CCCACACCAT ACTTGGGTGC AATCTCATCA TCCTGTACAT 
TTAGAGACAA AGTCGCCGCC TCACAAAGAG CCGATGTTTT ATTATTTTGC CTATGGCAGT
TGTATGTGTC CGGTGGATTT GAAGCGATCG CTTGGTGAGA ACACGCACCC TTATATTATC
GGCCCTGGAG TATTGAAAGG TTATCGTTTG GGATTTTATC TCTATTTACC AAGCCGTAAA
TGTGGTGTTT TAGATATAGT TAAAGACCCC AAAGCCAGTG TTAAAGGCGT ACTTTACCAA
TTACCTTTAC GCTTAAGTGA ATACTTAGAT CAACGTGAAG GTGTATCCCA AAACCTCTAT
CGTCATGAAT CAGTAGAGAT TCACAGCCAC AGTCGAGTGT ATCAAGATGT TCGCACATAC
GTAGTGGTGA ATAAATCAGA GGAAGAAGTT GCACCTAATG ACTGGTACTT CAATGTTGTT
CTTAGGGGTG CAGTTACCTG CGGATTGCCG GAAGAATATT GCTGGCATTT ATTCAATCAT
ATGCACAAGT TACAGCAGCG CCATCAAGAA CAGAAATTTA GGCGATCGGC ATGA
 
Protein sequence
MSHQSTHPHH TWVQSHHPVH LETKSPPHKE PMFYYFAYGS CMCPVDLKRS LGENTHPYII 
GPGVLKGYRL GFYLYLPSRK CGVLDIVKDP KASVKGVLYQ LPLRLSEYLD QREGVSQNLY
RHESVEIHSH SRVYQDVRTY VVVNKSEEEV APNDWYFNVV LRGAVTCGLP EEYCWHLFNH
MHKLQQRHQE QKFRRSA