| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4397 |
|---|
| Symbol | |
|---|
| ID | 3680524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 5509704 |
|---|
| End bp | 5510558 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637719750 |
|---|
| Product | arogenate dehydrogenase |
|---|
| Protein accession | YP_324890 |
|---|
| Protein GI | 75910594 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.229138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000184997 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA TGCAAATTGG AATTTTAGGT TTAGGCTTGA TTGGCGGTTC ATTGGGTTAT
GATTTGCGAT CGCAAGGTCA TCATGTTTTA GGTGTTAGCC GCAAGCAATC TACTTGTGAA
ACAGCAGTTT CCTTAGGTAG TGTTGATGAA GCCTCCGTTG ACATAAGCTT ATTAACAGCC
GCAGAAGTTG TATTTATTTG TACACCTATC GGTCTTATTG TTCCCCAAGT GGAGCAGTTG
ATTAATCATC TACCCCAGTC CACTGTGGTG ACTGATGTTG GGTCAGTGAA AGCACCGATA
GTTGAAGCGA TTTCCCCTCT GTGGGAAAAC TTTGTCGGTG GTCATCCAAT GGCTGGGACA
ACAGATAGTG GGATAGAATC TGCCCAAAGA AATTTATTTG CTCATAGACC TTATGTGTTA
ACACCAGAGC CGACAACACC CAAAGGAGCG ATCGCACTTG TAGAGGAAAT TGTGCGATCG
TTAGGGGCTA AGATTTACTA TTGTCAGCCA GAGCAACATG ACCGCGCCGT CAGTTGGATT
TCCCATTTAC CTGTCATGGT CAGTTCCTCC TTAATTGCCG CCTGCATCAG CGAAACTGAC
CCGGAAGTTT TACAATTAGC CCAAAACCTT GCTAGTTCAG GTTTTCGAGA TACTAGCCGC
GTTGGTGGTG GGAATCCAGA GTTAGGGGTG ATGATGGCGC AATACAATCG CCAAGCATTA
CTGGGGTCAT TGCACCAATA TCGCCGTAAT CTTGATGAGG TAATTGCTCT AGTTGAGCAG
GAAAATTGGT CAGCTTTAGA AACCAAGTTA CACACAACGC AACAAGCCAG ACCTAATTTT
GTGGATGAGA TTTAG
|
|---|
| Protein sequence | MIKMQIGILG LGLIGGSLGY DLRSQGHHVL GVSRKQSTCE TAVSLGSVDE ASVDISLLTA
AEVVFICTPI GLIVPQVEQL INHLPQSTVV TDVGSVKAPI VEAISPLWEN FVGGHPMAGT
TDSGIESAQR NLFAHRPYVL TPEPTTPKGA IALVEEIVRS LGAKIYYCQP EQHDRAVSWI
SHLPVMVSSS LIAACISETD PEVLQLAQNL ASSGFRDTSR VGGGNPELGV MMAQYNRQAL
LGSLHQYRRN LDEVIALVEQ ENWSALETKL HTTQQARPNF VDEI
|
|---|
| |