Gene Ava_4390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4390 
Symbol 
ID3680576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5500485 
End bp5501225 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content43% 
IMG OID637719743 
Producthypothetical protein 
Protein accessionYP_324883 
Protein GI75910587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000148707 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTCAAA AGTCGTCTCA AAGCCATCTG TCTACTTCAC AAAATCCTTA CATAGACAAC 
ATCAATCGTT CAGATAAATG GCAACAAAGG GTAGCCCAGG TAGCATATCG CTTTAACCAA
CAGTATCAAA ATCAAACTTT GGAACTACCA GCAGAAGTTC AGGAAATGCC GATTTATCGA
GAATGGGTTT CTGGCATATT GGCAGGAAAG ATTGCTTCTC CTTTCTGGGA AATTGCCCAA
CCCCAAAAAA ATCAACACTG TTTGGATATT GGTTGTGGAG TCAGTTTTTT GATTTATCCT
TGGCGAGATT GGCAAGCATT TTTTTATGGG CAAGAAGTGA GTAATGTAGC GCGAGATACC
CTTAATTCTC GTGGTTCTCA GTTGAATTCC AAGTTATTCA AAGGAGTGGA ATTAGGGGCA
GCCCATCAGC TAAAATACAC ATCGGCTTAT TTTGATCTAG CGATCGCCAC AGGATTCAGT
TGCTATTTTC CCCTGGAATA TTGGACATCT GTGTTACAAG CCGTGAAGCG TGTACTCAAA
CCAGGTGGAC ATTTTGTTTT TGATATCCTC AACGCCGCAC ACCCCCAAGC TGAAGATTGG
GCAGTGTTAG AAACTTACCT GGGTGCGGAG GTGTTTCTAG AACCTGTAGC CGAGTGGGAA
AAAATAATTA ACGCGGCTGG TGCTAAAGTA GTTGGACGAC AACCAGGGGA GTTCTTTGAT
TTGTACAAGC TACGGTTTTA A
 
Protein sequence
MSQKSSQSHL STSQNPYIDN INRSDKWQQR VAQVAYRFNQ QYQNQTLELP AEVQEMPIYR 
EWVSGILAGK IASPFWEIAQ PQKNQHCLDI GCGVSFLIYP WRDWQAFFYG QEVSNVARDT
LNSRGSQLNS KLFKGVELGA AHQLKYTSAY FDLAIATGFS CYFPLEYWTS VLQAVKRVLK
PGGHFVFDIL NAAHPQAEDW AVLETYLGAE VFLEPVAEWE KIINAAGAKV VGRQPGEFFD
LYKLRF