Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4390 |
Symbol | |
ID | 3680576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5500485 |
End bp | 5501225 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637719743 |
Product | hypothetical protein |
Protein accession | YP_324883 |
Protein GI | 75910587 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000148707 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTCAAA AGTCGTCTCA AAGCCATCTG TCTACTTCAC AAAATCCTTA CATAGACAAC ATCAATCGTT CAGATAAATG GCAACAAAGG GTAGCCCAGG TAGCATATCG CTTTAACCAA CAGTATCAAA ATCAAACTTT GGAACTACCA GCAGAAGTTC AGGAAATGCC GATTTATCGA GAATGGGTTT CTGGCATATT GGCAGGAAAG ATTGCTTCTC CTTTCTGGGA AATTGCCCAA CCCCAAAAAA ATCAACACTG TTTGGATATT GGTTGTGGAG TCAGTTTTTT GATTTATCCT TGGCGAGATT GGCAAGCATT TTTTTATGGG CAAGAAGTGA GTAATGTAGC GCGAGATACC CTTAATTCTC GTGGTTCTCA GTTGAATTCC AAGTTATTCA AAGGAGTGGA ATTAGGGGCA GCCCATCAGC TAAAATACAC ATCGGCTTAT TTTGATCTAG CGATCGCCAC AGGATTCAGT TGCTATTTTC CCCTGGAATA TTGGACATCT GTGTTACAAG CCGTGAAGCG TGTACTCAAA CCAGGTGGAC ATTTTGTTTT TGATATCCTC AACGCCGCAC ACCCCCAAGC TGAAGATTGG GCAGTGTTAG AAACTTACCT GGGTGCGGAG GTGTTTCTAG AACCTGTAGC CGAGTGGGAA AAAATAATTA ACGCGGCTGG TGCTAAAGTA GTTGGACGAC AACCAGGGGA GTTCTTTGAT TTGTACAAGC TACGGTTTTA A
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Protein sequence | MSQKSSQSHL STSQNPYIDN INRSDKWQQR VAQVAYRFNQ QYQNQTLELP AEVQEMPIYR EWVSGILAGK IASPFWEIAQ PQKNQHCLDI GCGVSFLIYP WRDWQAFFYG QEVSNVARDT LNSRGSQLNS KLFKGVELGA AHQLKYTSAY FDLAIATGFS CYFPLEYWTS VLQAVKRVLK PGGHFVFDIL NAAHPQAEDW AVLETYLGAE VFLEPVAEWE KIINAAGAKV VGRQPGEFFD LYKLRF
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