Gene Ava_4293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4293 
Symbol 
ID3680844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5380076 
End bp5380498 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content33% 
IMG OID637719642 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_324787 
Protein GI75910491 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTAC ATTTACTGAC AAAATCTCAT CAATTTCATT TGCAGCCTCT AAAACGGATC 
TTAATTGTCG AAGATAATGA TATCAATAGG ATGTTATTAA GTGATTATCT GAGTTATAGC
GGATATCATG TTCAAAGTTT ATCGGATGGC TCCAATTTTT TCAAAACCAT AGAGAAATTT
CAGCCTGACT TGATTTTGTT GGACTTGAAA TTACCAGATG TTGATGGATA CTATTTACTT
GAGCAAATCC AGCAACAGCA GGAATTTGCC AGGATACCAG TTATTGTTGT TTCAGGTTTT
GCTTTTAAAG TTGATCAAAA AAGAGCTATC GATTTGGGCG CTCGTGGTTA CTTTGTTAAA
CCTATAAATC TGAATGCTTT GCTTATAAAA ATTTCTCAGG AATTAGTTGT TAATTGCATA
TAG
 
Protein sequence
MTVHLLTKSH QFHLQPLKRI LIVEDNDINR MLLSDYLSYS GYHVQSLSDG SNFFKTIEKF 
QPDLILLDLK LPDVDGYYLL EQIQQQQEFA RIPVIVVSGF AFKVDQKRAI DLGARGYFVK
PINLNALLIK ISQELVVNCI