| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4186 |
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| Symbol | |
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| ID | 3680989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5243542 |
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| End bp | 5245386 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637719533 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_324680 |
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| Protein GI | 75910384 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00132881 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTCA GTCAATTGGT CAATGTTGAT TCTGACACAG TATCTAAAAC CGTTTATGAT
GCTGTCATAG TTGGAACAGG GGTAGCTGGA GCCATTGTTG CCAAAGAATT GAGTCAACAG
GGCAAGAAGG TTTTAATCAT TGAAGCTACA GTACACAAAG ATTTAACTCT TGCAGGCTTT
CAAAGTTATG TTGATACCTT CTACAAAGCG GTGGATAAAA ATCCTAACTC TCCCTATCCC
GCTAACGCTA ATGTTCCCAG CCCCACTGAT TACAACGACT ATTTTATAGA GAAGGGACCC
ATGCCTCTTG CGGGTTCCTA CACCAGGGTT CTGGGCGGAA CAACCATGCA CTGGGAAGCA
AAAACCCCAC GGATGTTACC GGAAGATTTC AAGTTATCCA GTACCTACGG ACAAGGTCTT
GATTGGCCGA TTAGCTATCA CGACCTTGAG CCGTATTACC GCAAAGCCGA GCATGAAATG
GGCGTTTGTG GAGACGTAGA AGAGCAGAAA AAACTAGGCC TTGAATTTCC CCAAGACTAT
GTTTTTCCCA TGGAAAAGCT CCCCCCCTCT TACTTGGATC AAAAAGTCAT TGAGAAAGTC
GATGGCACCA AGGTTGAACT CTATGGCAAG ACTCACACAA TCAGCTTTGC TACATTTCCT
CAAGCTCGTA ATGGAGTACC TAACCCTAAA TATGATCAAG GTAACCTCTT TGTTCCCGAT
GGAGTTACTA CTGTCCATCC TGTTCAATAT GGTGAACGTT GCCAAGGAAA TGCTAACTGT
GTTCCTATCT GTCCAGTTCA GGCAAAATAT GATGCTCGCA GAACTTTAAG TAAAGCCTTT
GAAACAGGTA GAGTTCATGT ACTCTACCAA GCAGTGGCTT ATAAGCTGGA ATACGATCGC
CAAAATGGTC GCATCACTGC CATTCACTAC AAAAACTATA AAAAACCCAA CTCTAGCGAT
TACACCACAG GAATCGCTAA GGGAACCGTA TTTGTCCTAG CGACTAATGC AGTCGAAAAC
GCTCGGCTAT TGCTCGGCTC TGACTTGCCT AACACCAGTG GATTGATAGG ACGCTATTTA
ATGGATCACC CCTTCACCTT AGCTTGGGCT TTGATGCCTG AAGTCACTGG TACTATGCGG
GGGCCTCTTG TAACATCAGG AATTGGCACA TTCCGTCAAG GTGATTTTCG TAAGAAACAA
TCCGCCTTTG CCGTAGACAT TCACAACGAT GGTTGGGGAT GGGCTACCGG ATCACCTAAG
AGTGAAGTAG AAGACGCGAT CGATAACAAA AACAAATATG GACAAGAACT GCGTCAGACA
TTGATTAGTC GAATTTCCCG ACAACTGTTG TTGGCTTTCA TGTGTGAATT ACTCCCTGAG
TACGGTAACC GAGTCACTAT CGATCCCAGA CACAAAGATA AACTGGGTAA TTATCGTCCC
GTCATTAATT TCAACCTACC CGACTACAGT CGTAGAACCC TTGCTTACAC CAGAAAAGTC
TCCCGCGTCA TCTTCGAGCG TTTAGGTGCA GAAGACTATA CTCACTACGA TCCTCAAGAC
CCTGCCTATT TTGAGTTTGA GGGTGAAGGC TACGTATACA AAGGTGGAAA CCACTTTTCG
GGAACTCATA TTATGGGAAC AACGCCCTCG AATTCAGTTG TTGATAGTTA TCTGCGTTCT
TGGGATCATA AAAATCTTTT CCTCGTCGGC GCAGGAAGTA TGCCCACCAT TGGTAGTTCC
AATACAACCT TAACCATTGC CGCATTGAGT TTTAGAACTG CCGAGCATAT CCTGCAAGAA
TTAAATTCTT ATAATTTGCC AGCTGCTAAT TTGCAAGCTC GCTAA
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| Protein sequence | MSLSQLVNVD SDTVSKTVYD AVIVGTGVAG AIVAKELSQQ GKKVLIIEAT VHKDLTLAGF
QSYVDTFYKA VDKNPNSPYP ANANVPSPTD YNDYFIEKGP MPLAGSYTRV LGGTTMHWEA
KTPRMLPEDF KLSSTYGQGL DWPISYHDLE PYYRKAEHEM GVCGDVEEQK KLGLEFPQDY
VFPMEKLPPS YLDQKVIEKV DGTKVELYGK THTISFATFP QARNGVPNPK YDQGNLFVPD
GVTTVHPVQY GERCQGNANC VPICPVQAKY DARRTLSKAF ETGRVHVLYQ AVAYKLEYDR
QNGRITAIHY KNYKKPNSSD YTTGIAKGTV FVLATNAVEN ARLLLGSDLP NTSGLIGRYL
MDHPFTLAWA LMPEVTGTMR GPLVTSGIGT FRQGDFRKKQ SAFAVDIHND GWGWATGSPK
SEVEDAIDNK NKYGQELRQT LISRISRQLL LAFMCELLPE YGNRVTIDPR HKDKLGNYRP
VINFNLPDYS RRTLAYTRKV SRVIFERLGA EDYTHYDPQD PAYFEFEGEG YVYKGGNHFS
GTHIMGTTPS NSVVDSYLRS WDHKNLFLVG AGSMPTIGSS NTTLTIAALS FRTAEHILQE
LNSYNLPAAN LQAR
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