| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4184 |
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| Symbol | |
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| ID | 3680987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5238786 |
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| End bp | 5241932 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637719531 |
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| Product | sensor protein |
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| Protein accession | YP_324678 |
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| Protein GI | 75910382 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00072831 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAAT TTAAAAGTGC ATTTATTTCT TATGGACGAG CAGATAGCAA AGCCTTTGCA
ACTAAGCTAT ATCAGCGATT TGTAGAAGCA GGACTAGAAA TTTGGTTTGA CCAAAACGAT
ATTCCTTTAG GTGTGGATTT CCAAAACCAA ATAGACGACG GAATTGAGAA ATCAGACAAT
TTTCTGTTTA TCATTGCGCC TCATTCAGTC AACTCTCCCT ATTGTGGTAA AGAAATAGAT
TTAGCACTCC GCCGGAATAA ACGCATTATT CCCTTGCTGC ACGTAGAGCA AATTACTCAA
GAAACTTGGC AACAACGCAA CCCTGGACGT GACGCTAGTG AGTGGGAAAA ATATCAAGCC
AAAGGGTTAC ATTCCAGTTT TCCTAATATG CACTCAGCTA TTAGTAAGAT TAACTGGGTA
TACTTCCGCG AAGGTATAGA CGACTTTGAG AAATCATTGG CGGGACTGTT GGAGTTATTT
CGCCGCCATC AGGATTATGT ACATCAACAC ACCTATTTTT TAGCCAAAGC CCTGGAATGG
GAGCAAAAAC AACAACAATC ACAATACCTG TTAATTGGTG AAGAACGAGA ACAAGCTGAA
AATTGGCTAA AAATTAGGTT TAAAGATGAA CAAGCGCCCT GTGAGCCAAC CGATTTACAC
TGCGCCTTTA TTTGTCAGAG TATCAAGAAT GCTAACAACC TGATGACTCA GGTGTTCCTC
TCCTACTCCG AAAAAGAGAG GATGTTTATG GAAAAAATTG CCAAAATTTT GATGCGAGAA
AGCTTTACAG TTTGGACTAA CAAAACAGAT ATTCAATCTG GAGCAGATTT TACCGAGTCG
ATTAATCGAG GTATTGAGGA AGCAGATAAT GTGGTTTTTC TCTTGTCGCC AGCCTCTCTG
CAATCAGAAT ACTGTCAACT GGAACTAACT TATGCTTTTT CTCTCAAAAA GCGGATTATT
CCCCTGTTGC TTGAACCAGT GGATCTAGAG CAGATTCCTG TGGAATTACG TATTTTGCAG
TTCATCGACT TTACAGATCA AGAAGAGGAG GGGAAAGAAT CTGCCGATAC TGATAGGCTC
ATTAATGTGC TGCGTCGAGA TGCGGCTTAC TACGAGCAAC ATAAAATCTT ACTAGCAAAA
GCTCTCAAGT GGGAACGACA AAAACGTAAT CCTAGTATTT TGTTGCGTAA TCACAATCTG
CGTAACGCTG AAGCCTGGTT AAAGATAGCT CAACAAAACA CACAACATCC ACCCATACCT
TTACAAACAG AATTCATCAC TGAAAGCAGC AAGCAACCGC CAGAAGCGGC GCTGGATGTA
TTTATTTCCT ACTCTCGTGC TGACTCTGAC TTTGCCCGTA AACTTAACGA TACCCTGCAA
ATTCAAAACA AGACTACTTG GTTTGATCAG GAGAGTATCG CCTCTGGTAC AAATTTTGAG
CAAGAGATTT ACCGAGGAAT AGAAAGCGCC AACAATTTCT TATTTATTAT TTCGCCTAAA
TCTATCAGTT CACCCTACTG CGTGACTGAA GTAGAATATG CGATGAATTT AAATAAGCGA
ATCGTGACCG TTTTATATCG GGACATAGGA GAAGCAACCC TTCATCCTGG GTTAGCAAAA
GTGCAGTGGA TTGATTTCAG CCCACGAGAC ACAGACTTTC TGACTAAATT CGGGGAACTA
ACCAGAACAT TAGATTCAGA TCCAGAATAT GTGCGATCGC ACACTCGGAT TTTTCTGAGG
GCAAAGGAGT GGGAAGATCA CAATCGGGAC AATAGCTTCT TACTCCGGGG CAAAGATTTG
CTAGCCTCTG AGGAATGGTT GAAGCAATCT GATCATAAAC AACCAGCCCC CACAACTTTA
CAATTAGATT ATCTCGCTGC CAGTCAAGCT CTCCCCTATC GCAAAATTAA GCTGCGTAGT
GTCTTGTTGA CTAGCTTGGC TGTGACAACA ATAGTTTTTA TTGCCAGGTT CCTTGGATTC
ACTCAGTCCT TAGAACTAGC AATGTATGAC CGGATGATGT CGTTACGTCG TGATGAACCA
CAGGATGAAC GATTTTTAAT GGTTGATGTT GATCCTCAAA GTCTTGAGGC GTTGAATGAA
GACAAAAGAT ATTCGGGTGG TAGAGGTTCA ATTCCTGATC AAGCTTTAGA CGATGTACTC
AAAATTCTTT CCCAGTCCCA ACCCAGTGTC ATTGGGTTAG ATTTTGTCCG TGATTTTCAT
GCCGAAGGTA GCCTAAAAGA GCGTTTGCAG CAAACTAAAA ACTTATTTAC GGTCTGTAAG
AACAGTTATG TAAGGGATAG TGAAAAAATT CGTGGCTTTA AACATCCCCC AGAAGTGCCT
TTAGCGCGAA TTGGGTTTAG CGACTTGGTT GATGATGATG CTAAAGGTGG TCGTTTTGTG
CGCCGACAAT ACTTGATGCA AAGTCCAGAC CCTAAATATT GCAATACAAG GGAAGCTTTT
AGTTTAGTAA TTGCTCGTCA CTATCTAGAA GCCCAAGGTC AAAAGTACAT TTCTCCTCTC
GATATCAAGA GCAAAAGATA TGTCCAGGAT ATGCAGTTCG GTAAAACCCG CATTCCCCAA
TTACTAGGAA AAGGAGGTGC TTACCAGGAT ATAAATAACC AGTTGGAAGG ATATCAAACA
ATGCTCAAAT ATCGTCTTTC TGGAGGTGTT CCCTACAATT TTGCCCCTAG AAAGAATATT
TTAGAAGTTT TAAACAATCA GGTTGCTCCT GAACAAATTA GAAACAAAAT TGTACTCATT
GGCTTTACTG ATAGACAAAC CAGACAAGCT GATTACTGGA GTACGGTCTA TGGTGATGTT
GCAGGCGTGA CACTGCATGG ACAAATGATC AGTCAGATCG TCAGTGCTAC TTTAGATAAT
CGCCAACTCA TCTGGTGGTG GCCGCTTGGT TATGAAACAC TCTGGATGTT TGGTTGGGCT
TTGGTAGGGG GTATTGTTTG TTGGCGATTT AACCGCACTC TCTATATAGG TATAGCGGTG
GTTGGATCTA TTGCCTGTCT CTTCATCATT TGCTCAGTAA TTTTAGTCTA TCAAAGCGGT
TGGATACCTT TTAAACCACC GTTTTTGGCA TTACTGGGTA CTGGGGCAGG CGTATTATAT
TTAACTAATA ACCTCCGTAA AAATTAA
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| Protein sequence | MNKFKSAFIS YGRADSKAFA TKLYQRFVEA GLEIWFDQND IPLGVDFQNQ IDDGIEKSDN
FLFIIAPHSV NSPYCGKEID LALRRNKRII PLLHVEQITQ ETWQQRNPGR DASEWEKYQA
KGLHSSFPNM HSAISKINWV YFREGIDDFE KSLAGLLELF RRHQDYVHQH TYFLAKALEW
EQKQQQSQYL LIGEEREQAE NWLKIRFKDE QAPCEPTDLH CAFICQSIKN ANNLMTQVFL
SYSEKERMFM EKIAKILMRE SFTVWTNKTD IQSGADFTES INRGIEEADN VVFLLSPASL
QSEYCQLELT YAFSLKKRII PLLLEPVDLE QIPVELRILQ FIDFTDQEEE GKESADTDRL
INVLRRDAAY YEQHKILLAK ALKWERQKRN PSILLRNHNL RNAEAWLKIA QQNTQHPPIP
LQTEFITESS KQPPEAALDV FISYSRADSD FARKLNDTLQ IQNKTTWFDQ ESIASGTNFE
QEIYRGIESA NNFLFIISPK SISSPYCVTE VEYAMNLNKR IVTVLYRDIG EATLHPGLAK
VQWIDFSPRD TDFLTKFGEL TRTLDSDPEY VRSHTRIFLR AKEWEDHNRD NSFLLRGKDL
LASEEWLKQS DHKQPAPTTL QLDYLAASQA LPYRKIKLRS VLLTSLAVTT IVFIARFLGF
TQSLELAMYD RMMSLRRDEP QDERFLMVDV DPQSLEALNE DKRYSGGRGS IPDQALDDVL
KILSQSQPSV IGLDFVRDFH AEGSLKERLQ QTKNLFTVCK NSYVRDSEKI RGFKHPPEVP
LARIGFSDLV DDDAKGGRFV RRQYLMQSPD PKYCNTREAF SLVIARHYLE AQGQKYISPL
DIKSKRYVQD MQFGKTRIPQ LLGKGGAYQD INNQLEGYQT MLKYRLSGGV PYNFAPRKNI
LEVLNNQVAP EQIRNKIVLI GFTDRQTRQA DYWSTVYGDV AGVTLHGQMI SQIVSATLDN
RQLIWWWPLG YETLWMFGWA LVGGIVCWRF NRTLYIGIAV VGSIACLFII CSVILVYQSG
WIPFKPPFLA LLGTGAGVLY LTNNLRKN
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