| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4182 |
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| Symbol | |
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| ID | 3681043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5233736 |
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| End bp | 5235562 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637719529 |
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| Product | surface antigen variable number |
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| Protein accession | YP_324676 |
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| Protein GI | 75910380 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000105717 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCGCT TGCTGGATAG GCGATCGCCT AACGCATTTC CATACTATTC AGATCCACTC
ACAAAGCAAG CTCAAAACCT TGTCAGGTGT GACAATCTTA CAAAATCTCT TCATCGGATT
CTGTTGACAA ATCGCTCTCA TATATTACTG TTGCTCACGG GGTTAATTCT CGGCTTTTAT
CCACAACGGT TGGCGGCTCA AGTAATTCCC AATGAGGTGA AACCGCCTTC AACTCAACCA
CTACCGGAAC CAGCACCCCT ACCAGCTTTA CCGCCTCCAG AACAACTCCT ACCCACTACA
CCACAGTCAC CAACTCAGCC AGATGTTAAT CCGCAGACAT TAGCGGAAAC ATTGATAGTA
GATCGGTTTG AGTTTGTGGG TAACACAGTT TTTAGTACCC AAGAACTAAC AAATCTGACG
GCTGGTTATC TCAAACGCCC CATTACCTTT AATGATTTAC TGAAGATTCG TTCAGAGTTG
ACGAAATTAT ATATAGATAG AGGCTATGTC ACCTCTGGGG TAATTCTTCC GCCGCAAACT
GTGAAAGCGG GGGTATTAGT GATGCAGGTG GTAGAAGGAA GTTTAGAAAA AATCAATGTC
ACCGGTACGC GCCGCCTTAA CCCCAGCTAT ATCCGCGATC GCCTGGCGAT TGCTGCGGGT
AAACCATTAT CACGCGATCG CCTACTCACA GGACTGCAAC TATTACAACT CGATCCTTTA
ATTAAAAGCA TATCTACAGA TTTACAAGCC GGCATCCGTC CGGGTACGAA TATTTTAGAA
GTTAAAGTTA CTGAAGCCGA TTCTTTTAGT ACTCAACTAG CGCTGGATAA CCAACGTAGT
CCCAGTGTGG GAAGTTTTCG GCGGCGCATT CATGTTAACG AAGCCAATTT GTTAGGGCTG
GGAGATGGTT TAAATATCGG CTATACCAAC ACTGATGGTA GCAATGGCTT TGATGTGAGC
TATAGTCTAC CAGTTAACCC GCGCAACGGT AAGCTGATTT TTAGCTATGG CAATACTCAC
AGTAATGTTA TAGAAAATCC TTTTAACTCC TTGGATATTA CATCCCAGTC CAGCTACTAC
GAATTAACCT TCCATCAACC CCTGCTGCAA ACTCCCAGCC AAGAATTCAC TCTAGGAATT
ACCGCCAGCC ACCAAAGAAG TCAAACATTT TTAGGTTTGG AAGATATCGG GCCGTTTCCT
CTAGCGGTTG GTGCTGATGA CGAAGGAAAC ACAAGGGTTT CAGCTATCCG ATTTTTTCAG
GAATGGAGTC AACGCAGTAG CCGACAAGTC ATAGCCGCGC GATCGCAATT TAGTTTCGGG
TTGGGTATTT TAGATGCCAC AATCAATAAC GATGAACCGG ATAGCCGTTT TTTTAGCTGG
CGTGGACAAG CTCAATGGTT GCGCCAGTTA GCGCCTGATA CTTTACTGCT GCTACAAGCT
GATATGCAGT TAGCAGATAG AAAATTGTTG GGAGTGGAAC AATTTGGTAT CGGTGGACAA
ACAAGTGTAC GCGGATATCG TCAAGATCAG TTGTTAACAG ATAATGGCGT GCAAGCAACC
GTCGAACTTC GCCTACCGAT TCTCCGCATT CCTCAAGGAG TCTTGCAAAT CACGCCTTTT
GTAGATGTCG GTACAGGCTG GAATCATGGC GGCGCAAATG CTGATAATAC TTTAGTCAGT
ACGGGTATGG GTTTGCAGTG GCGACAGGGT AATAATTTCA GTGCGCGTTT AGATTGGGGT
ATTCCTCTGA CATCTGTTGA TTCCCAGAGG AAAGAAACAT GGCAAGAAAA CGGTTTGTAT
TTCTCTATTA TCTATAGGCC TTTTTAG
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| Protein sequence | MNRLLDRRSP NAFPYYSDPL TKQAQNLVRC DNLTKSLHRI LLTNRSHILL LLTGLILGFY
PQRLAAQVIP NEVKPPSTQP LPEPAPLPAL PPPEQLLPTT PQSPTQPDVN PQTLAETLIV
DRFEFVGNTV FSTQELTNLT AGYLKRPITF NDLLKIRSEL TKLYIDRGYV TSGVILPPQT
VKAGVLVMQV VEGSLEKINV TGTRRLNPSY IRDRLAIAAG KPLSRDRLLT GLQLLQLDPL
IKSISTDLQA GIRPGTNILE VKVTEADSFS TQLALDNQRS PSVGSFRRRI HVNEANLLGL
GDGLNIGYTN TDGSNGFDVS YSLPVNPRNG KLIFSYGNTH SNVIENPFNS LDITSQSSYY
ELTFHQPLLQ TPSQEFTLGI TASHQRSQTF LGLEDIGPFP LAVGADDEGN TRVSAIRFFQ
EWSQRSSRQV IAARSQFSFG LGILDATINN DEPDSRFFSW RGQAQWLRQL APDTLLLLQA
DMQLADRKLL GVEQFGIGGQ TSVRGYRQDQ LLTDNGVQAT VELRLPILRI PQGVLQITPF
VDVGTGWNHG GANADNTLVS TGMGLQWRQG NNFSARLDWG IPLTSVDSQR KETWQENGLY
FSIIYRPF
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