| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4174 |
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| Symbol | |
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| ID | 3681035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5223900 |
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| End bp | 5224772 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637719521 |
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| Product | CRISPR-associated Cas5e family protein |
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| Protein accession | YP_324668 |
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| Protein GI | 75910372 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5551] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000203943 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTCATA GCTTAGTTTT AAACCTGCTT CCCCAATCTC CCATTCCCCC GCAATATATC
ACCGGTAGAC ATTTACACGC CTTATTTCTC ACCCTTGTTA GTTCTGTTGA TAGCACATTA
GGCGATCGCT TGCACGACTC TACCGCCGAT AAAGCCTTCA CCCTTTCTCC CTTGCAAATT
AAGGGAGAGG AACGGGGTAG ATATAAATCG AAAATCCCTC ATGGCCAATC ATTGCAATAC
TTCCATCAGC AAGCCATCCC CGCCGGAACG CCTTGTTGGT GGCGCATCTC CTTACTTGAT
GACACCTTAT TTAGCCAACT AACGCAACTA TGGCTTAATC TTAACCCTAG CCATCCTTGG
CATCTCGGCC CGGCTAACTT GTATATTACC AGCATTCAAG GCACACCCCA ATCCACCCAA
CCTTGGGCAA ATGCTACTAC CTATGCTCAA TTGTATGAGC AAGCTGGTGA GAGCAATGAT
GTGCGATCGC TCGTAAATAA TCGTACACTA AACTTTACCT TCACCACACC CACAGCCTTC
CGCCAGGGAA AATTTGACAC CACCCTTCCC ACCAGAGAAT GTGTATTTAA CTCTCTCCTT
TCCCGATGGA ATAAATACAG TGGTATAGAA TTTTCTGAAA TTGCCATTGA ATCAATTTTT
CCCTCGTTTC TCAATATTCA CACAGAAATA TTAGCCGATT CTCGTAGTAA ATTTATTGGT
ATTCTTGGAG AAATCAACTA TCGAATTTTA GGTGATATAG AGCCAATTCA AATTAAGCAA
ATCAATGCCT TAGCAGACTT TGCTATGTAT GCAGGAATAG GGCGTAAAAC TACAATGGGA
ATGGGTATGA TTCGGCGGTT GTATTCTGCA TAA
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| Protein sequence | MPHSLVLNLL PQSPIPPQYI TGRHLHALFL TLVSSVDSTL GDRLHDSTAD KAFTLSPLQI
KGEERGRYKS KIPHGQSLQY FHQQAIPAGT PCWWRISLLD DTLFSQLTQL WLNLNPSHPW
HLGPANLYIT SIQGTPQSTQ PWANATTYAQ LYEQAGESND VRSLVNNRTL NFTFTTPTAF
RQGKFDTTLP TRECVFNSLL SRWNKYSGIE FSEIAIESIF PSFLNIHTEI LADSRSKFIG
ILGEINYRIL GDIEPIQIKQ INALADFAMY AGIGRKTTMG MGMIRRLYSA
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