| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4165 |
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| Symbol | |
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| ID | 3681026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5213459 |
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| End bp | 5215636 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637719512 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_324659 |
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| Protein GI | 75910363 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03158] CRISPR-associated helicase, Cyano-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000750963 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000030126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCGAAA GTTACAAAAT TACTCTCAAG TCCGTTTATT CTCAAACCGT CCCCACACCT
GATGGGGTGC AAATACCTGA AAATTGGTCA CTATCTTGGC ATCAAGCCGC AACTTTACAA
GCACTACGCA ATCCCAATAT TGACGTAGTG TTCAATACTG CAATGACAGG CGATGGTAAA
AGCTTGGCTG CATATTTAGA AGTTCTCCAG GGTGAATTTT CTGCAATTGG ACTTTACCCA
ACTAATGAAT TAGCCCGTGA TCAAGAAATA CAAATTCAGG GATATATAGA AGTATTCAAA
CCAGAAAATC AACCCCGTGT AGTTAGATTG AGTGGGGCTG ATTTAGAAGT TTATGCAGAA
AATGAGGGAT TGAAAAAAGG TCAAGCAATT GGTACTCTCA CTAGCCAAAG AGAAGCGTTA
TTAACAAACC CAGATATTTT CCATTATTTA CATAGAGGGG CTTACATAAT TCGTAGCGAC
AGTCCCGATA AACTCTGGGG AAAAATAGAC AAGGATTTTG ACTTATTTAT TTTTGATGAA
TTTCACGTTT TCGCAGCACC ACAAATAGCT AGTGTAATTA ACACGATGTT GTTAATTCGC
TGTACAAATC GCCGGAAGAA GTTTCTATTT CTTTCTGCGA CACCAGATAG TAATTTAATT
GATAGGCTAA AACTAGCAGG ATTTCGCTGT CAAGAAATCA ACCCAATTGC ACAAGAAAAA
TATCAATTTC CTGACAATCC AGAATTAGAA CAGCAACTTA AAACTCAAGG ATGGCGACAA
GTTGCGCGGA CAATATCATT GGATTTTATT CCTTTAGAGC CGAGTTTTAA AGCCTCAGAA
GTTTGGTTAA AGGAAAATAG TAATTTAATT TTAGAGCAGT TTCAGCAATA TCCAGGAAGT
AAAGGCGCAA TTATTCTTAA CTCAATTGCA GCAGTAAAAC GGTTGACTCC ATTTTTTCAA
GAAATTTTAC AGCCTCATGG ATTACAAGTA GGAGAAAATA CAGGGTTATC AGGAAAGGCG
GAAAAAGAGC GGAGTTTGTC GGCTGATTTA GTTTTAGGAA CCAGCACAAT TGATGTCGGG
GTTGATTTTA AAATCAATTT TTTAATTTTT GAATCCTCGG ATGCTGGTAA CTTTATTCAA
CGCTTGGGAC GCTTGGGTAG GCATGACGGT TATGAAAAAG ATGGTGCAAA AATTAAGTTT
CAAAATTTTA CAGCGTTTGC TTTAGTTCCT AACTTTTTGG TAGAACGCTT ATTTTCGGGA
GATACACCAC CTTTAGAGGT GAATAAGATT TGCGATCGCC CGACTTTTCA TAAGATTATC
GCGGATAAAT ATCGCCAAAT CAATGATTTT CGTGGCTATT ATAAACGTTG GGGTGCAGTA
CAGTCATTTT ACTTGTGTTG GCAATTAGGC GATCGCACCA TTAAACAACA GTACGCCCAA
AGCCGAGAAC AGTTGCTAAA AGCCTGTGAG GAAGTATTTG ACACCAGTTT AAAATCTGTA
GCTGGACGTG TTGCAGGATG GGCAAAAGAT TGGCAAGCAC TATCAGGTAA ACAGGGAAAT
CCCATTGGTG ATGATGCTGC TAGTTTTCGC GGTTCGAGTC CTTTGCAATG TGGTTTGTAT
GATTTAACGG AAGAAAACGA AGCAGACAGA TTTAAAACCT ACGATTTACC TGGAATTTTA
GGTAATTTAG AAATCGAAGT GTGGACGGAA GCGGCATTTA CACGGACACT TAAGGAAACC
GCAGCGCGTA CCGGACAACC CATAGCTAAA GGTAGATTTG CTCACTGTCT AGCATTTATG
AAGTTGCGTT CCTACCGTGA GGAAAGGGTG AACTGGAAAT TTACCTACTC TGGCGACTTG
CAGCCAATTG CTGATGCTTG GAAAGTTCAA GTTTTAACGG GTGTGGAAAT TTGGCAACCT
GAAAACTATT GGATTGGGGA AATCAACAAA CGACTGAAGA AGGAAGGTTT AGTCTGTTAT
GTGCTGCGCC GTCCTGTGGC AGAAGTGCGG ATGCGGCTAA GGCTACCGAT GCACTTTCAG
ATTTACCCAA TTAGCGATCG CTACAGTTTT CATGATACGA CAGCACCTTA TTCCATAGCT
TTTGGTCATT CTGCGTTGTT GCTGGACACT TTGGCATACA CCTTTAAAAG TAAAGGAGAT
GAAATATGGA TTGCTTGA
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| Protein sequence | MSESYKITLK SVYSQTVPTP DGVQIPENWS LSWHQAATLQ ALRNPNIDVV FNTAMTGDGK
SLAAYLEVLQ GEFSAIGLYP TNELARDQEI QIQGYIEVFK PENQPRVVRL SGADLEVYAE
NEGLKKGQAI GTLTSQREAL LTNPDIFHYL HRGAYIIRSD SPDKLWGKID KDFDLFIFDE
FHVFAAPQIA SVINTMLLIR CTNRRKKFLF LSATPDSNLI DRLKLAGFRC QEINPIAQEK
YQFPDNPELE QQLKTQGWRQ VARTISLDFI PLEPSFKASE VWLKENSNLI LEQFQQYPGS
KGAIILNSIA AVKRLTPFFQ EILQPHGLQV GENTGLSGKA EKERSLSADL VLGTSTIDVG
VDFKINFLIF ESSDAGNFIQ RLGRLGRHDG YEKDGAKIKF QNFTAFALVP NFLVERLFSG
DTPPLEVNKI CDRPTFHKII ADKYRQINDF RGYYKRWGAV QSFYLCWQLG DRTIKQQYAQ
SREQLLKACE EVFDTSLKSV AGRVAGWAKD WQALSGKQGN PIGDDAASFR GSSPLQCGLY
DLTEENEADR FKTYDLPGIL GNLEIEVWTE AAFTRTLKET AARTGQPIAK GRFAHCLAFM
KLRSYREERV NWKFTYSGDL QPIADAWKVQ VLTGVEIWQP ENYWIGEINK RLKKEGLVCY
VLRRPVAEVR MRLRLPMHFQ IYPISDRYSF HDTTAPYSIA FGHSALLLDT LAYTFKSKGD
EIWIA
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