| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4135 |
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| Symbol | |
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| ID | 3681211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5152475 |
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| End bp | 5155243 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637719481 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_324629 |
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| Protein GI | 75910333 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000370631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0140414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTCAT CTGCAAAAAC AATTATCGGC TATATACACA AGGTATGTTT CCAAGATTGG
CGCAGTATAT TCATGACAGC ACCAGTCGTG GCAATATGCG TCATGACTGG AGGAATGGCG
GGGTTATTTC AACTGCTGGA ATGGAACATG ATGGAGCAAT ATTATGCTCT ACGTCCTGTT
GAATCAATAG ACAAACGGAT TTTAATTGTT ACTATTGATG AACAAGACAT CACTCAAATT
GGCAAATGGC CTATTCCTGA CCTGATTTTA GCCAAGCTAA TTGTTAAACT CAAAGCACAA
AAACCAGCAA CTATAGGCTT GGATATCTAT CGAGATTTGC CAGTAGAACC AGGTCATCAA
GAATTGGTGG GAGTGATTAA ATCTACGCCT AACTTAATTG GAATCAAAAA ATTAGTAGGG
GATCAAGTTG CTCCATCACC TACTTTATCT GAACTAGGTC AAATTGCACT TGCTGATTTA
GTCGCAGATA CAGATGGTAA AGTCAGGCGC GGTTTATTAT CTGCTGGTGA TAGTGAGGAG
AAAATTTTTT TAGGATTAGC ACCTCGCTTA AGTCTGATGT ATCTTCAAAG TAAAGGTATT
GCTTTAGAGG AACTAAATCC AACTGGCACT TCTTTACGGT TAGGGAAAGC AGTATTTACA
CCTTTGACTG GCGAAGAATT TAGTTATCGA GGTACAGATG TTGGAGGATA CCAAATTATG
TTGAATTACC GTGGTTTTCA AGGTAATTTT GACACTGTGA AAATGCGGGA TATCCTCAAT
GATTCTATAT CATCAGAATT AATACGCGAT CGCATTATTT TGATTGGAAC TACGGCTAAG
AGTATTAATG ATTTTGTTAA CGTTGGTTAC AGTCACAATG TGCAGGATGA CGAGAAACGC
ATGGCTGGGG TAGTAGTTCA TGCCAATTTA GTCAGCCAAA TTTTAAGTGC TGCTCTTGAT
GGTAGACCAT TGTTGCGAGT TTGTTCTGAG CAAGCAGAGT GGCTATTGAT ATTTTTTTGG
TCTTTTATCA ATAGTGTTGT TACTTGGTAT GGGTTGCAAG TCAACTCTCA GCGCAAACAG
TCTTTACCAG GATGGCCGAT TCTGGTGATT TTATTGAGTA CAAGTATAAT CTTCGGTAGT
AGCTATACTG CATTTATGAT TGGTTGGTGG ATTCCTGTAA TGTCACCACT GTTGACAACT
TTTCTGTCTA TAATTGTTAC TACTAATCTG TATAAACAAT TACAACTAGA AAAAGCTAAC
CAGCAACTCC AAGATTATTC TCGCACATTG GAAGAAAAAG TGCGCGATCG CACCCAAGAG
TTAGAAACCG CCAAAATTGC TGCTGATGTT GCCAATCAAG CTAAAAGTGA ATTTTTAGCA
AGCATGAGTC ATGAGTTGCG TACACCCCTC AATGGGATTT TAGGATACGC ACAAATCCTA
GAACGCTCTG AAAACATAGC GCCGACAGTA TTAGAAGGCA TTAACATTAT TCATCAGTGT
GGTTCTCACT TGCTTACTCT CATCAACGAT ATTTTAGACT TGTCCAAAAT CGAGGCGGGA
AAACTGGAAT TACACAATAC GGATTTTGAT TTTTCCTACT TCCTTACAGG AGTAGTAGAA
ATGTGCCGTA TTCGTGCTTT ACAAAAAGGT ATCTCTTTTC ATTATTTACC AGATCCCCAT
CTCCCTCAAG CAATTAATGC TGATGAAAAA CGTTTACGAC AAATAATAAT TAATTTACTT
GGTAATGCCA TTAAGTTTAC TGAGACAGGT GGAGTCAATT TCACAATACA AGTCCTAGAA
GTAGGAGCCA ATTTCCACAA AATCAGATTT CAAGTGGAAG ATACAGGAGT GGGAATGACT
CCTGAACAAT TGACAAAGAT TTTTTTACCT TTTGAGCAAG TAGGAGATAA AAGTAAACAA
GTAGAAGGTA CCGGATTAGG TCTAGCTATT AGTTGTAAAA TGGCTGAATT AATGGGTGGT
CAAATTCAAG TAGATAGCAT TTTGGGAACT GGTAGCAAAT TTTGGCTAGA TTTAAATTTA
AATATTATCA GTCACTGGTT ACAAACATCT AGTATATTTC ATAAGAAAAA AATTATCGGT
ATTCAAGGCA AACAACCAAG AATTCTCGTT GTAGATGACA AATGGGAAAA CCGTTCTATA
ATTTGTAATT TCTTACGATC AATTGGTTTT GAATGCCTTG AAGCCACCAA TGGACAAGAA
GGATTAAATA TAGCAGTAAC AAATCAGCCT GATTTGATTA TTACTGACTT AGCTATGCCA
GTTATAGATG GCTTTGAAAT GATCCAAACC TTAAGAAGTC TACCTCAAAC ATCCAACGTC
ACCATTTTAG TATCTTCTGC CAGTGTGTTT GAAAGTGATA GAAAAAAAAG CTTGCAAATA
GGAGGAAATG AATTTTTACC AAAACCTTTA GAAATTGATA AATTACTCCA GTATTTACAA
GATTATTTAC AACTTGATTG GATTTATATA GAAGATAGCA AACAAACAAA AGTTTCTGAA
AATCAACCGT CTCAGTTTAA TAAACATCAA TTGATAGTTA CGCCGCCAAT TTCAGCGCTT
GATAAGCTAT TGGATTTGTC TATGAGAGGC AACATCAAAG GAATACAAAT AATATTGAAT
GAAATAGAGG AATTAGATGC CACTGGTAAT CTTACCGGCT TTGTGACACA AGTTAGACAA
TTATGCGATA GCTTTCAAAT TAAACAAATC CGCGAATTAA TAAAATATTT AAAAACTGGC
ACATCATGA
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| Protein sequence | MRSSAKTIIG YIHKVCFQDW RSIFMTAPVV AICVMTGGMA GLFQLLEWNM MEQYYALRPV
ESIDKRILIV TIDEQDITQI GKWPIPDLIL AKLIVKLKAQ KPATIGLDIY RDLPVEPGHQ
ELVGVIKSTP NLIGIKKLVG DQVAPSPTLS ELGQIALADL VADTDGKVRR GLLSAGDSEE
KIFLGLAPRL SLMYLQSKGI ALEELNPTGT SLRLGKAVFT PLTGEEFSYR GTDVGGYQIM
LNYRGFQGNF DTVKMRDILN DSISSELIRD RIILIGTTAK SINDFVNVGY SHNVQDDEKR
MAGVVVHANL VSQILSAALD GRPLLRVCSE QAEWLLIFFW SFINSVVTWY GLQVNSQRKQ
SLPGWPILVI LLSTSIIFGS SYTAFMIGWW IPVMSPLLTT FLSIIVTTNL YKQLQLEKAN
QQLQDYSRTL EEKVRDRTQE LETAKIAADV ANQAKSEFLA SMSHELRTPL NGILGYAQIL
ERSENIAPTV LEGINIIHQC GSHLLTLIND ILDLSKIEAG KLELHNTDFD FSYFLTGVVE
MCRIRALQKG ISFHYLPDPH LPQAINADEK RLRQIIINLL GNAIKFTETG GVNFTIQVLE
VGANFHKIRF QVEDTGVGMT PEQLTKIFLP FEQVGDKSKQ VEGTGLGLAI SCKMAELMGG
QIQVDSILGT GSKFWLDLNL NIISHWLQTS SIFHKKKIIG IQGKQPRILV VDDKWENRSI
ICNFLRSIGF ECLEATNGQE GLNIAVTNQP DLIITDLAMP VIDGFEMIQT LRSLPQTSNV
TILVSSASVF ESDRKKSLQI GGNEFLPKPL EIDKLLQYLQ DYLQLDWIYI EDSKQTKVSE
NQPSQFNKHQ LIVTPPISAL DKLLDLSMRG NIKGIQIILN EIEELDATGN LTGFVTQVRQ
LCDSFQIKQI RELIKYLKTG TS
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