Gene Ava_4127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4127 
Symbol 
ID3681203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5141655 
End bp5142101 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content39% 
IMG OID637719473 
Producttransposase 
Protein accessionYP_324621 
Protein GI75910325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00330669 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTATTAT ATTATTTGAT ACCAAACAAA TCAGTATCAA ACGTGTTTGT CTACGAGTAC 
AAAGTCAACC CAAAACCACA ACAAATATCT GCTATCAATG AAGCAATCAG GACATCACAA
TTTGTCCGAA ATAAAGTGCT GCGTTATTGG ATGGATAACC GTGGTGTTGG CAAGACGGAA
ATGTTTAGAT ACAACACCTT ACTGAGGAAA GAATTTAAGT TTGTAGAGGA TTTAAATTCT
CATGCCTGCC AAACTGCTGT TGAGCGAGTC TTGAAAGCGG TTAACCGTTT TTACGACAAC
TGCAAGCGTG GGATTTCAGG TAAGAAAGGG TATCCCAAAT TCAAGAAAAA CACTCGCTCG
GTTGAGTACA AAGTCTCTGG ATGGAAACTA TCATCAGACC GAAAGCATAT TACTTGTAAG
GATTCAGGTC TAATATTGCG GAAGTAA
 
Protein sequence
MLLYYLIPNK SVSNVFVYEY KVNPKPQQIS AINEAIRTSQ FVRNKVLRYW MDNRGVGKTE 
MFRYNTLLRK EFKFVEDLNS HACQTAVERV LKAVNRFYDN CKRGISGKKG YPKFKKNTRS
VEYKVSGWKL SSDRKHITCK DSGLILRK