Gene Ava_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4038 
Symbol 
ID3682167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5023139 
End bp5024293 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content44% 
IMG OID637719390 
ProductABC transporter-like 
Protein accessionYP_324538 
Protein GI75910242 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.608472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAT TGCATAAGTT AAGGTCGTTT ATCAATTTAG AATCCCCTCC TATGAAATCA 
CAGGAAAATC AGGAGGAAAT CAATCAATAT ATCCTGAATA TGCGTCAGGT GAACGTTGAT
AGTAAAAGCC GCAAAAATCT TCTATCAATT GATAATTTCG CTGTGCGTCC AGGGGAATTA
GTCGCTGTAG TTGGCCCTAA TGGTGCGGGT AAAAGCACCC TGTTAAGAAC CATCAATATG
TTGCAATCCT ATTGTGGGGA AATGCAATTA TTTGGACAGG ATGCTCGTCA AGTGAATCAA
ACAGCCTTGC GTCGTCGTTC TGCATTGGTG TTTCAAGAAA CATTACTGTT GGATGACACT
GTATTTAATA ATGTTGCCAG AGTCTTACAG TTTCGCGGTG TACCCAAGCA CCAAATTAAG
CATAGGGTAT ATACTGCCCT GGAAACATTC GGCTGTGAAC ATTTAGCACA TCGACAAGCC
CGCGCCCTTT CTGGTGGCGA AGGTAAGCGG GTGTGTATTG CCTGTGGGTT GGTAGCTGAT
CCAGAATTGC TGTTATTAGA TGAGCCTTCC GCCTACTTAG ATGTGGCGAT TCGTCCGCAA
ATCATCGAGA AAATTCGCCA ATGGGCGGAA GCTAGAGGGG CTGCGGTGAT ATTAGTCAGC
CATAACTTTA CAGATATCTT GAATTTTGCC GATCGCGCGA TCGCATTATT TGACGGTGGA
ATTATCCAAG ACGATAAGTT AGAAATGCTT ATCCGTCGTC CAGCTAACCA ACAACTCGCC
AGACTTGTCG GTATGGATAA CGTCATCCCT TGTCAAATAG AACCAGAACA CCGTGGTTAT
TTGATTAAGT TAGCTAACAC TATGGAGTTT TCTTATTATG GCGAAATCAA TGCACCCATC
ACAGCCTGTT GTCTATCCGG CGATGCGTTC CATATTGACG ATACACGTTC TGCAATTCCG
CAACAGCCAG GATCAGTCTC TATTCAAGGC AGGGTAGAAC GGATTGTGCG GGGTGTGGGA
ACTTATACCA TCAAGGTGAA GGTGGGAGAA CAAACTTTAA CGGCTAGAGT TCCTCGTAAT
GATGTGTCAG AGAATGTTTA CCATCACAGT TTGATTAAGT TGGCTTTTCA TCCAAGAGAT
GCTCATTTTG TATGA
 
Protein sequence
MSKLHKLRSF INLESPPMKS QENQEEINQY ILNMRQVNVD SKSRKNLLSI DNFAVRPGEL 
VAVVGPNGAG KSTLLRTINM LQSYCGEMQL FGQDARQVNQ TALRRRSALV FQETLLLDDT
VFNNVARVLQ FRGVPKHQIK HRVYTALETF GCEHLAHRQA RALSGGEGKR VCIACGLVAD
PELLLLDEPS AYLDVAIRPQ IIEKIRQWAE ARGAAVILVS HNFTDILNFA DRAIALFDGG
IIQDDKLEML IRRPANQQLA RLVGMDNVIP CQIEPEHRGY LIKLANTMEF SYYGEINAPI
TACCLSGDAF HIDDTRSAIP QQPGSVSIQG RVERIVRGVG TYTIKVKVGE QTLTARVPRN
DVSENVYHHS LIKLAFHPRD AHFV