Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3959 |
Symbol | |
ID | 3682556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4907341 |
End bp | 4907907 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637719311 |
Product | hypothetical protein |
Protein accession | YP_324459 |
Protein GI | 75910163 |
COG category | [C] Energy production and conversion |
COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000666734 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00242089 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTGACA AATTTCTGAC GTTATCAGAG TTTAATCTTG AGGGTAATTT TTTGGGCTTT GCTGGTAAGA AGCCGAGAAA AGTTAAATAT TTAAGTTTGG CAGTTCCCTC CGGTGATGTG TTAGTTAAAC TACCGAAAAA ATTACGTGGT TGTTTGAGTT CATCTTTAGA AATAGGTGAA CCAATTAATA TTTATGGAAC CTGTAAGTTA AACAGATATA CAGGCACAAT TAAACTGAAA GCTTATCAAG TAATACCATT TACTTCTAAC CCAGATCAAT GTTTACCATC ACCACCACCA GCTAAAATTA TGGTGTGCCA AAAATCTGGT TGTGTTAAAC GCGGTGGTGA AGGGTTATTG TCGGAATTAG AAAAAACTTT GTGCGATCGC GGTTTACTCG ACAAGGTGAC AATAGAACAC ACTGGTTGTC AAAAACGCTG TAGCAGCGCC CCTAACTGTG TTCTGATGTT GGGTAAGAAA AAATACAAGA AAATCCATCC AGAGGCGATC GCTTCTCTGC TAGAAAATTA TTTAACTGCT GATCACCCCT GTCACACAGA GGATTAG
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Protein sequence | MGDKFLTLSE FNLEGNFLGF AGKKPRKVKY LSLAVPSGDV LVKLPKKLRG CLSSSLEIGE PINIYGTCKL NRYTGTIKLK AYQVIPFTSN PDQCLPSPPP AKIMVCQKSG CVKRGGEGLL SELEKTLCDR GLLDKVTIEH TGCQKRCSSA PNCVLMLGKK KYKKIHPEAI ASLLENYLTA DHPCHTED
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