Gene Ava_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3959 
Symbol 
ID3682556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4907341 
End bp4907907 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content39% 
IMG OID637719311 
Producthypothetical protein 
Protein accessionYP_324459 
Protein GI75910163 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000666734 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00242089 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTGACA AATTTCTGAC GTTATCAGAG TTTAATCTTG AGGGTAATTT TTTGGGCTTT 
GCTGGTAAGA AGCCGAGAAA AGTTAAATAT TTAAGTTTGG CAGTTCCCTC CGGTGATGTG
TTAGTTAAAC TACCGAAAAA ATTACGTGGT TGTTTGAGTT CATCTTTAGA AATAGGTGAA
CCAATTAATA TTTATGGAAC CTGTAAGTTA AACAGATATA CAGGCACAAT TAAACTGAAA
GCTTATCAAG TAATACCATT TACTTCTAAC CCAGATCAAT GTTTACCATC ACCACCACCA
GCTAAAATTA TGGTGTGCCA AAAATCTGGT TGTGTTAAAC GCGGTGGTGA AGGGTTATTG
TCGGAATTAG AAAAAACTTT GTGCGATCGC GGTTTACTCG ACAAGGTGAC AATAGAACAC
ACTGGTTGTC AAAAACGCTG TAGCAGCGCC CCTAACTGTG TTCTGATGTT GGGTAAGAAA
AAATACAAGA AAATCCATCC AGAGGCGATC GCTTCTCTGC TAGAAAATTA TTTAACTGCT
GATCACCCCT GTCACACAGA GGATTAG
 
Protein sequence
MGDKFLTLSE FNLEGNFLGF AGKKPRKVKY LSLAVPSGDV LVKLPKKLRG CLSSSLEIGE 
PINIYGTCKL NRYTGTIKLK AYQVIPFTSN PDQCLPSPPP AKIMVCQKSG CVKRGGEGLL
SELEKTLCDR GLLDKVTIEH TGCQKRCSSA PNCVLMLGKK KYKKIHPEAI ASLLENYLTA
DHPCHTED