Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3903 |
Symbol | |
ID | 3683576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4853884 |
End bp | 4855128 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637719255 |
Product | ribulose 1,5-bisphosphate carboxylase small subunit |
Protein accession | YP_324403 |
Protein GI | 75910107 |
COG category | [C] Energy production and conversion |
COG ID | [COG4451] Ribulose bisphosphate carboxylase small subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTATT ATATCGCTCC GCGCTTTCTG GATAAACTTG CTGTTCACAT CACCAAAAAC TTTTTAAATA TTCCTGGTGT GCGAGTTCCC TTAATTTTAG GGATTCATGG ACGTAAAGGA GAAGGGAAAA CCTTTCAGTG TGAGTTAGCT TTTGAGAAGA TGGGTATTGA AGTCACACTC ATCTCCGGCG GTGAATTGGA AAGTCCCGAT GCGGGAGACC CAGCCCGGTT GATTCGGCTG CGCTATCGGG AAACGGCAGA ACTGATTAAA GTGCGGGGTA AAATGTGCGT GCTGATGATT AACGATTTAG ATGCAGGTGC AGGACGCTTT GATGAAGGTA CGCAATATAC TGTAAATACT CAGTTGGTAA ATGCCACACT GATGAATATT GCCGATAATC CCACAGATGT ACAGTTACCC GGTAGTTATG ATTCCAACCC GATACGGCGT GTCCCCATTA TCGTGACAGG TAATGATTTT TCTACTCTCT ACGCACCATT GATTCGGGAT GGACGGATGG AGAAATTCTA TTGGGAACCC AACCGCGATG ATAAGGTGGG AATTGTCGGG GGGATTTTTG CTGAGGATGG ACTCTCAAAA CGAGAAATTG AACAATTAGT TGATACTTTC CCCAAGCAAT CGATTGACTT TTTTAGCGCT TTACGTTCTC GAATTTACGA CGAACAAATC CGCGACTTTA TCCATCAAGT TGGGTTTGAA CGTATATCTC TACGTGTTGT GAACAGCGTA GAAGCGCCGC CAGAATTTAA AAAGCCAGAT TTCAGCCTTG CTCATTTGAT CGAGTCTGGT AACTTGGTGT TGGGTGAACA ACAACGGGTA GACAATTCTC AGCTAGTGGA TGAGTATAAT CGATTGAATC GCGGGAGGGG TTATCAAGCA GCGCCACCGC CTGAAGCGCC CATGATTCAG CCAGTCAATA ATAGTTCTCA CAAGCGAGAG ACATCTAATA CTCATTTGAG TTTAGAAACC CAAGAACAAA TCCGGCAAAT CTTGTCTCAA GGTCACAAAA TTACTTTTGA ACACGTAGAT GCACGCCGCT TCCGCACGGG TTCTTGGCAA AGTTGCGGTA CTCTGCATAT TGATGCAGAG TCAGATGCTA TTTCAACACT AGAGGCTTGC TTAGTTGATT ATGAGGGTGA GTATGTGCGC TTGGTAGGGA TAGACCCGAA AGGTAAGCGG CGGGTTGTGG AGACAATTAT TCAACGACCA AATGACAAAA ACTAA
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Protein sequence | MSYYIAPRFL DKLAVHITKN FLNIPGVRVP LILGIHGRKG EGKTFQCELA FEKMGIEVTL ISGGELESPD AGDPARLIRL RYRETAELIK VRGKMCVLMI NDLDAGAGRF DEGTQYTVNT QLVNATLMNI ADNPTDVQLP GSYDSNPIRR VPIIVTGNDF STLYAPLIRD GRMEKFYWEP NRDDKVGIVG GIFAEDGLSK REIEQLVDTF PKQSIDFFSA LRSRIYDEQI RDFIHQVGFE RISLRVVNSV EAPPEFKKPD FSLAHLIESG NLVLGEQQRV DNSQLVDEYN RLNRGRGYQA APPPEAPMIQ PVNNSSHKRE TSNTHLSLET QEQIRQILSQ GHKITFEHVD ARRFRTGSWQ SCGTLHIDAE SDAISTLEAC LVDYEGEYVR LVGIDPKGKR RVVETIIQRP NDKN
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