Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3888 |
Symbol | |
ID | 3683619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4842189 |
End bp | 4842965 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637719240 |
Product | Fatty acid desaturase |
Protein accession | YP_324388 |
Protein GI | 75910092 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCAGT GTCAACCATC ATCTCTACGT GCAGAAAAAC TGGTTTTATT GTCATCGACA ATTAGGGATG ATAAAAATAT TAATAAGGGT ATATTTGTTG CCTGTTTTAT CTTATTTTTA TGGGCAATTA GTTTAATCTT ATTACTCTCA ATAGATACAT CCATAATTAA TCAGGGCTTA TTAATCATAG CCATGCTTTG GCAGACATTC TTATATACAG GTTTATTTAT TACTGCCCAT GATGCCATGC ACGGCGTAGT TTATCCCAAA AATCCCAAAA TAAATAATTT TATAGGTAAG CTCACTCTCA TCTTGTATGG ACTATTTCCT TATAAAGATT TATTGAAAAA ACATTGGTTA CACCACGGAC ATCCTGGTAC TGATTTAGAC CCTGATTATT ACAATGGTCA TCCCCAAAAC TTCTTTCTTT GGTATCTACA TTTTATGAAG TCTTATTGGA GATGGACACA AATTTTCGGA TTAGTGATGA TTTTTCACGG ACTTAAAAGT ATTGTACATA TACCAGAAAA TAATTTAATT ATATTTTGGA TGATCCCTTC TATTTTAAGT TCAGTACAAC TATTTTATTT TGGTACATTT TTACCGCATA AAAAGCTAGA AGGTGGTTAT ACTAACCCCC ATTGTGCGCG CAGTATCCCA TTACCTCTTT TTTGGTCTTT CGTCACTTGC TATCACTTCG GTTACCACAA AGAGCATCAC GAATATCCTC AACTTCCTTG GTGGAAATTA CCGGAAGCTT ACAAAATATC TTTATAA
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Protein sequence | MVQCQPSSLR AEKLVLLSST IRDDKNINKG IFVACFILFL WAISLILLLS IDTSIINQGL LIIAMLWQTF LYTGLFITAH DAMHGVVYPK NPKINNFIGK LTLILYGLFP YKDLLKKHWL HHGHPGTDLD PDYYNGHPQN FFLWYLHFMK SYWRWTQIFG LVMIFHGLKS IVHIPENNLI IFWMIPSILS SVQLFYFGTF LPHKKLEGGY TNPHCARSIP LPLFWSFVTC YHFGYHKEHH EYPQLPWWKL PEAYKISL
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