Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3877 |
Symbol | |
ID | 3683608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4830423 |
End bp | 4831226 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637719229 |
Product | hypothetical protein |
Protein accession | YP_324377 |
Protein GI | 75910081 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00473154 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACTT TAAAACCGAT CCAACTATTA TTAGCCTTAA CTGTTGGCTA CACCAGTTTA TTAGGCGCAA ATTCTGGGTT ATTAGCAACG ACACCTGTTA ACCCACGTAA CAATAACAAT ATAAGTACTG CTCACAAAAA AAATACCTTT GTTCAACCGC CTCTACCTAA TTCAGAACGT CGTCCTGGTG GGCGTGTTCG TGGTGGTGCT AAACGGGGTA CTTGCCCATC GGTTGAACCT CAACTCACCG CTTTAGTACC ATTCACTCAA GATGCTCCCA CAATCACCAA TGTTTGGGGA TTGACAACAA AGGCGCATCC GACATTTTTG TTTTATGTGC CGTATGCCAA AGATTCTGGC TATCCGACAG AATTTGTTTT GCAAGACCAG GATACAAATA TTATTTACCA AAAGGCGATC GCTCTACCTG AAAAACCAGG AATTATTAGT GTTTCTCTGC CTGCGGATGT TGCCGGTTTA GCTGTAGATA AGCAATATCG TTGGTTTTTC ACCGTAGAGT GCGACCAACA AAAGCCAGCA CCCCCAATTT ATGTTGAAGG AGTCGTTCAA AGAGTCCAAC TTACACCCGC AACTGCCAAG CAACTGGAAA CAGCATCACC ATTACAACAA GTAGCCATCT ATGGGGAAAA TGGCATTTGG TTCGAGGCAG CCAACACACT GTTTCAGATG CTGCAAACAA ATCCTCAAGA CCCAGCCATC CAAGAAAATT GGCGGCGATT ACTCACCAGC ATTAGCTTGG GTGACATTGT AACCAAACCT ATGGTTTCCC ATAAACTTCA GTAG
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Protein sequence | MSTLKPIQLL LALTVGYTSL LGANSGLLAT TPVNPRNNNN ISTAHKKNTF VQPPLPNSER RPGGRVRGGA KRGTCPSVEP QLTALVPFTQ DAPTITNVWG LTTKAHPTFL FYVPYAKDSG YPTEFVLQDQ DTNIIYQKAI ALPEKPGIIS VSLPADVAGL AVDKQYRWFF TVECDQQKPA PPIYVEGVVQ RVQLTPATAK QLETASPLQQ VAIYGENGIW FEAANTLFQM LQTNPQDPAI QENWRRLLTS ISLGDIVTKP MVSHKLQ
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