Gene Ava_3877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3877 
Symbol 
ID3683608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4830423 
End bp4831226 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content44% 
IMG OID637719229 
Producthypothetical protein 
Protein accessionYP_324377 
Protein GI75910081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00473154 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTT TAAAACCGAT CCAACTATTA TTAGCCTTAA CTGTTGGCTA CACCAGTTTA 
TTAGGCGCAA ATTCTGGGTT ATTAGCAACG ACACCTGTTA ACCCACGTAA CAATAACAAT
ATAAGTACTG CTCACAAAAA AAATACCTTT GTTCAACCGC CTCTACCTAA TTCAGAACGT
CGTCCTGGTG GGCGTGTTCG TGGTGGTGCT AAACGGGGTA CTTGCCCATC GGTTGAACCT
CAACTCACCG CTTTAGTACC ATTCACTCAA GATGCTCCCA CAATCACCAA TGTTTGGGGA
TTGACAACAA AGGCGCATCC GACATTTTTG TTTTATGTGC CGTATGCCAA AGATTCTGGC
TATCCGACAG AATTTGTTTT GCAAGACCAG GATACAAATA TTATTTACCA AAAGGCGATC
GCTCTACCTG AAAAACCAGG AATTATTAGT GTTTCTCTGC CTGCGGATGT TGCCGGTTTA
GCTGTAGATA AGCAATATCG TTGGTTTTTC ACCGTAGAGT GCGACCAACA AAAGCCAGCA
CCCCCAATTT ATGTTGAAGG AGTCGTTCAA AGAGTCCAAC TTACACCCGC AACTGCCAAG
CAACTGGAAA CAGCATCACC ATTACAACAA GTAGCCATCT ATGGGGAAAA TGGCATTTGG
TTCGAGGCAG CCAACACACT GTTTCAGATG CTGCAAACAA ATCCTCAAGA CCCAGCCATC
CAAGAAAATT GGCGGCGATT ACTCACCAGC ATTAGCTTGG GTGACATTGT AACCAAACCT
ATGGTTTCCC ATAAACTTCA GTAG
 
Protein sequence
MSTLKPIQLL LALTVGYTSL LGANSGLLAT TPVNPRNNNN ISTAHKKNTF VQPPLPNSER 
RPGGRVRGGA KRGTCPSVEP QLTALVPFTQ DAPTITNVWG LTTKAHPTFL FYVPYAKDSG
YPTEFVLQDQ DTNIIYQKAI ALPEKPGIIS VSLPADVAGL AVDKQYRWFF TVECDQQKPA
PPIYVEGVVQ RVQLTPATAK QLETASPLQQ VAIYGENGIW FEAANTLFQM LQTNPQDPAI
QENWRRLLTS ISLGDIVTKP MVSHKLQ