Gene Ava_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3843 
Symbol 
ID3678736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4784189 
End bp4785148 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content47% 
IMG OID637719195 
Productsteroid delta-isomerase 
Protein accessionYP_324343 
Protein GI75910047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA CTATCGATTC CGCCCGTCGT ATCTTCCCCA ACACATTACA GGCTGATGCA 
GTGCCAGCGC TGACTGCACG ATTCAACCAA CTTAGTGCAG AAGATCAACT GGCATGGACA
TGGTTCGCTT TCTTAGAGAT GGGCAAAACC ATTACTGTTG CAGCCCCTGG TGCAGCTAGT
ATGCAGTTTG CAGAAGGCAT TCTCAAGCAA ATCAAAGAAA TGACCTTTGA AGAACAAACT
CAGGTTATGT GCGATCTGGC AAACCACACA GATACGCCCA TTTGCCGCAC CTATGCTACT
TGGTCACCTA ATATCAAGCT AGGTTTTTGG AATCAACTGG GAGAATGGAT GGAGCAAGGT
GTTGTTGCAC CAATTCCTGC TGGCTATCAG CTTTCAGCCA ATGCTAATGC CGTATTGGAA
ACCCTGAAAA GTCTGGATCA AGGACAACAG ATTACCGTCC TCCGCAGTTC TGTTGTAGAC
ATGGGATTTG ATGCAGCTAA ACTAGGCGGC TATACAAGAG TTTCTGAACC AGTAGTTGCA
CCTAAAGATA TTTCCCAGCG TGTTCAAGTC TCCATTGAGG GAATTAACAA TCCCACTGTG
TTGAATTACA TGAACAACTT GAACGCCAAT GACTTTGATG AACTGATCAA GTTGTTCGTG
GAGGATGGAG CTTTACAGCC TCCCTTCCAA AGACCAATCG TTGGTAAGGA TGCGATTCTG
CGGTTCTTCC GTGAAGAATG CCAGAACCTC AACTTGCTCC CAGAGCGCGG TGTAGCTGAA
CCCGCAGAGG ATGGTTACAC TCAGGTGAAA GTGACAGGTA AAGTTCAGAC CCCTTGGTTT
GGTGCAGCAG TAGGGATGAA CATGGCTTGG CGCTTCTTGC TCAACCCCCA AGGTAAAATC
TTTTTTGTCG CTATTGACTT GTTAGCCTCT CCCAAGGAAC TTTTGAACTT GGTTCGCTAA
 
Protein sequence
MAITIDSARR IFPNTLQADA VPALTARFNQ LSAEDQLAWT WFAFLEMGKT ITVAAPGAAS 
MQFAEGILKQ IKEMTFEEQT QVMCDLANHT DTPICRTYAT WSPNIKLGFW NQLGEWMEQG
VVAPIPAGYQ LSANANAVLE TLKSLDQGQQ ITVLRSSVVD MGFDAAKLGG YTRVSEPVVA
PKDISQRVQV SIEGINNPTV LNYMNNLNAN DFDELIKLFV EDGALQPPFQ RPIVGKDAIL
RFFREECQNL NLLPERGVAE PAEDGYTQVK VTGKVQTPWF GAAVGMNMAW RFLLNPQGKI
FFVAIDLLAS PKELLNLVR