| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3784 |
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| Symbol | |
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| ID | 3678812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4716879 |
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| End bp | 4719065 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637719135 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_324284 |
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| Protein GI | 75909988 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAC GCTTGCTAGT GGTTGAATCT CCGGGTAAAG TGAAAAAGCT CAGTCAGATT
TTGGGTTCTG AGTGGATTGT CCGTGCTTCT TGTGGACACA TTCGGGAACT GAGTGATGAG
GGTGAGGATG CTTTGGGGTT CAGCATGGAT GGTGGTAGTG TGCAGTGTCA CTACGTACCG
CGTGACCAAC GTTCAAAAGA AACTATCCAG CAGTTAAAGA GTGCGGCGAA GCAGGTGAGT
GAAGTTGTGT TAGCGACTGA CCCGGATAGG GAAGGCGAAA CCATTGCTTG GCATCTCAAG
GAAGTACTGG GATTGAGAGA ACCGAAACGA GTTGTCTATA CAGAGATTAC AGCCTCGGCG
GTACAGAGTG CGATCGCTCA TCCACGCAAA CTGGACTTAA ATTTAGTCGG GGCGGGATTG
TGTCGAGATT GTTTAGATAA GTTGGTCGGG TATAAGGGTA GTCCTCTGGT TTGGGCGTTA
AATAATGGGG CAAAGAGTGT GGGGAGAGTG CAGAGTTCTA CACTCCACCT GATTTGTCAA
CGGGAGAGAG AAATTCAAAG TTTTGTACCT CAAGATTATT GGAGTGTTTG GGTTGATTAT
GTTGAAGGTT TCCGCGCTTT CTATAAAGGT GCAGTCAACA CTCGCTCAGA CTCTCCAGAA
ACAGAAGTAG AAATTCATGA TGATGCGGCG GGAAATAGCA CAACTGCGCC TGAGTCTACC
CGCGTGCTGG CGGAAGCAGA AGCTAATCGT TTAGTAGAAG AAGCACGCCG TCATCCCCAC
CAAATTGTGC AGTATGAGGG AAAAATTGCC AACCGTCAAC CACCCCCACC TTTTATTACT
TCCACCTTGC AACAAGCGGC TGGTTCTAAG TTGAAGTTCG CGCCAGAGAA GACGATGCAG
CTAGCCCAAA AGTTGTATGA GGCTGGGTTG ATTACATATA TGCGGACAGA CTCGGTAATG
TTGAGTCCAG AGTTTTGTGA AAGTGCGCGT CAGTGGTTGG AGCAAAATGA CCCCCAGAAT
GTACCGAAGC AGGTTGCAAG ACATCGCAGT AGTAAGACAG CCCAACAAGG ACACGAAGCG
ATTCGCCCAA CTGATGTGTT TCGTCCTTCC GCCCAGTTGC GAATAGAACT ATCCACAGAT
GAGTTTAACT TGTATGTGAT GATTTGGAAA CGGGCGATCG CTTCCCAATG TCGTCCAGCC
CAACTACGAA AAACGGTTGT AATTACCCAG TCTGGTCAAA TTCTCTGGCA AGCAAGAGGA
CAAGTAGTAG AATTTCTCGG TTACACCCGT TACTGGCCTA ACCTCAGCAA GGATACCCTC
TTACCCACCT TGCAACAAGG GCAAATGGTC ACTTTAGAAA ATGCTGGTCA CGAAAAGAAA
CAAACCCAAC CCCCACCACG CTACAGCGAA CCCAAGTTAG TGCAACTGAT GGAACGTAAA
GGTATTGGTC GTCCCAGTAC CTATTCTCCC ACCATTGCCA CCCTGAAGAA ACGGGGTTAT
GTGGAATTGA CCAAAGACAA CTTACACCCA ACAAATCTAG GGTTAGAAGT TGATACTTTC
TTACAAAAAG CCCTACCGGA TTTACTAGAA GCGGAATTTA CTGCCAAAAT GGAGAATGCC
CTAGATGCGA TCGCTGAAGG TAAACAACCT TGGCAAATAT ACTTAACCAC TTGGAATCAG
AATTATTTTG CCCCTGCTTT AGCCAAAGCC AAAACCATAG CTGTCGATTC AGGTAATCCG
ACAAAAACCT TTCCCCCGCG TCAATACGAT ACTAGCCGGA CTCGTTGCCC TGATTGTAAT
AACTTTCTCA GCAAAATTCC CAGCAGTAAA CTGAAGAAAA AATACTTCCT CAAATGCACT
AGCGGTTGTG AAAACACAGT CTTATTCTGG AGTGAATTTA GTAAGACTTG GCAAGCGCCC
CGAACAAAAG ATGACAAGAT GGCAGAAAAT GGGCAAAAGA ATCATCTCTC ACCTGCAACG
AAACTTCCTA CTCAGTTGAC AGCATACCCC TGTCCAGTAT GTAAAAGACC TTTGGAGGAG
TATACTTACA CCAAAGATGG ACAGAAAAAA ACTATGCTGC GTTGCTCTGC ATCCTCATCT
CGCACTGATA AAAAACATCA AGATGTGGCT TATTTCCACA CTGCTAAAGG TTGGTGGAGT
CCTAAGTTTG GGGAAATAAA TAAATGA
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| Protein sequence | MPKRLLVVES PGKVKKLSQI LGSEWIVRAS CGHIRELSDE GEDALGFSMD GGSVQCHYVP
RDQRSKETIQ QLKSAAKQVS EVVLATDPDR EGETIAWHLK EVLGLREPKR VVYTEITASA
VQSAIAHPRK LDLNLVGAGL CRDCLDKLVG YKGSPLVWAL NNGAKSVGRV QSSTLHLICQ
REREIQSFVP QDYWSVWVDY VEGFRAFYKG AVNTRSDSPE TEVEIHDDAA GNSTTAPEST
RVLAEAEANR LVEEARRHPH QIVQYEGKIA NRQPPPPFIT STLQQAAGSK LKFAPEKTMQ
LAQKLYEAGL ITYMRTDSVM LSPEFCESAR QWLEQNDPQN VPKQVARHRS SKTAQQGHEA
IRPTDVFRPS AQLRIELSTD EFNLYVMIWK RAIASQCRPA QLRKTVVITQ SGQILWQARG
QVVEFLGYTR YWPNLSKDTL LPTLQQGQMV TLENAGHEKK QTQPPPRYSE PKLVQLMERK
GIGRPSTYSP TIATLKKRGY VELTKDNLHP TNLGLEVDTF LQKALPDLLE AEFTAKMENA
LDAIAEGKQP WQIYLTTWNQ NYFAPALAKA KTIAVDSGNP TKTFPPRQYD TSRTRCPDCN
NFLSKIPSSK LKKKYFLKCT SGCENTVLFW SEFSKTWQAP RTKDDKMAEN GQKNHLSPAT
KLPTQLTAYP CPVCKRPLEE YTYTKDGQKK TMLRCSASSS RTDKKHQDVA YFHTAKGWWS
PKFGEINK
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