Gene Ava_3705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3705 
Symbol 
ID3678791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4613216 
End bp4614349 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content43% 
IMG OID637719055 
Productinner-membrane translocator 
Protein accessionYP_324205 
Protein GI75909909 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAT ATTTAATTTT TTTAGCAATT TCTACGGCAA CATTTGCCCT GTTTAGCTTG 
GGACTGAATT TACAGTGGGG TTTTACGGGG CTAATTAACT TTGGTCATAT CGCTTTTATG
ACTTTGGGGG CTTACACTAC TGTATTGTTA AGCCTCAAGG GTGTGCCGTT ATTTATTTCA
GCTATTTTTG GAGCAATTTT CGCCGCTTTG TTGGGATTGG TGATTGGTTT TGCTACTTTG
CGTCTGCGGG AAGATTATTT AGCCATTGTC ACCATTGGAA CGGGAGAACT GATTCGCTTA
GTGGTGAATA ACCAAGATTT ACCAGTAGGT AATACCTGGG TATCTGGAGC CTTTGGGGTA
CAGAGTTATC CTATACCTTT ATCTACAGAG CCAAATTTGT TTTTCCGCCT GTTGATGATT
GGAATTTTAA CGCTGCTGTT TGCTGTGACT GTGTTTTCGT TATGGCGCTG GATTCGGAAC
GCCCAGAAAT TACAGCTTAC TAATTCGACT GATAAAACAA GTAGTAAGCA AGAGATTGCT
TCCCGTTTCG GTGTAGGAAT TATTTTAGGG TTATTGGCAA CAGCCATTTA TATTTCTGGG
GTAATCACAC TCTATAACTA CATCCCCAAA GCCGGTTTAA TGCTGGTGTC GCTGTTGGTA
TTGGCGTTTG TCTTTTGGCG TTTGGAATAT TTAGTGCGAT CGCCTTGGGG TCGTGTGCTA
AAAGCTATCC GCGAAGATGA AGAAATACCT AAAGCGATGG GTAAGAATGT CTTTTGGTAT
AAACTCCAGT CTCTCATGTT GGGTGGGGCG ATCGCTGGTG TAGCTGGGGC TTTCTTCGCT
TGGCAACTCA GCGCCATTTA TCCTGATAAC TTCCAACCAC AGCTAACTTT TGACTCCTGG
ATTATGGTAA TTTTAGGCGG CTCTGGTAAT AATATCGGCA CAATTTTGGG TGCTGTAATT
TACTTCGCTT ACGATGCCAT TACTCGTGAG GTTTTACCGA AAATTATCCC CCTTGATGAG
GCGCGTCTGG GTGCATTCCG CATCATGTGT ATTGGTTTAA TTTTGATGGT GCTGATGATT
TGGCGGCCTC AAGGTATCTT AGGGAAAAAG GAGGAACTCA CCCTTGGTAA ATAA
 
Protein sequence
MIEYLIFLAI STATFALFSL GLNLQWGFTG LINFGHIAFM TLGAYTTVLL SLKGVPLFIS 
AIFGAIFAAL LGLVIGFATL RLREDYLAIV TIGTGELIRL VVNNQDLPVG NTWVSGAFGV
QSYPIPLSTE PNLFFRLLMI GILTLLFAVT VFSLWRWIRN AQKLQLTNST DKTSSKQEIA
SRFGVGIILG LLATAIYISG VITLYNYIPK AGLMLVSLLV LAFVFWRLEY LVRSPWGRVL
KAIREDEEIP KAMGKNVFWY KLQSLMLGGA IAGVAGAFFA WQLSAIYPDN FQPQLTFDSW
IMVILGGSGN NIGTILGAVI YFAYDAITRE VLPKIIPLDE ARLGAFRIMC IGLILMVLMI
WRPQGILGKK EELTLGK