| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3570 |
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| Symbol | |
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| ID | 3679516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4445263 |
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| End bp | 4446060 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637718921 |
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| Product | LmbE-like protein |
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| Protein accession | YP_324071 |
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| Protein GI | 75909775 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.839683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00474608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAGCCAA AATTGTCGCA TAAAATCTAT TTAAAAGAAC TAGGAAAACT AATTCCTATT
GTATGGCTTG AGAAAGTGCA GTATATACAT TCTTGGTTAC TATTAAAATG GCTTTTGTTT
TGTAATAGCA AGCCATTGTT ATCTAACCAA AAATCAGCCA TGATATTTTC TCCACATCAA
GATGATGAAA CTTTTGGCTG TGGCGGGATG ATTGCTTACA AACGAGAGCA TGGCATACCA
GTGGTAGTAG TATTTATCAC CGATGGGAAA GGTTCAAGAA GTCTCGACCT AGATTGCCAA
AATCAGATAG TCCAAACTCG GAAACAAGAA GCAATTAGTG CATTAGGAAT ATTGGGTGTA
GAGTCATCAC ATATTCACTT TTTATCTAAG CCAGATGGGT GTTTACCAGA ATTAAGTAAT
GAAGAACATC AGCAGACAAT TCGAGAGATA TCTGAACTAA TTCAGCATTA TCAGCCTGAG
GAAATTTATG TGCCACATAG GAAAGACTGT CATAGGGATC ATGAGGCTAC TTATAACTTA
GTTAAAACAG TAATTCGTGA AGCCAATATT CCTGTGGAAG TGTTCCAATA TCCTGTATGG
TTATTTTGGA GAGCGCCGCT ATTTATCCTA TTGAAAATAC AGGATATTGC TGCTGCTTAT
CGTTTTTCTA TTACTTCAGT ACAAGATAAG AAAAAGAGAG CGATCGCCTC ATATTCTTCT
CAGATTGAAA ATTTACCTAG AGGATTTATC AAGCAATTCC TAAATTCTCA CGAAATTTTC
TTTAAAAGTG AACTGTAA
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| Protein sequence | MEPKLSHKIY LKELGKLIPI VWLEKVQYIH SWLLLKWLLF CNSKPLLSNQ KSAMIFSPHQ
DDETFGCGGM IAYKREHGIP VVVVFITDGK GSRSLDLDCQ NQIVQTRKQE AISALGILGV
ESSHIHFLSK PDGCLPELSN EEHQQTIREI SELIQHYQPE EIYVPHRKDC HRDHEATYNL
VKTVIREANI PVEVFQYPVW LFWRAPLFIL LKIQDIAAAY RFSITSVQDK KKRAIASYSS
QIENLPRGFI KQFLNSHEIF FKSEL
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