Gene Ava_3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3562 
Symbol 
ID3679508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4435181 
End bp4436365 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content32% 
IMG OID637718913 
ProductATPase-like 
Protein accessionYP_324063 
Protein GI75909767 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.76495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.327688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAATGA AACTGATCAC AGCAAAAATT GAAAATTTTA AAAGCTTAGG CAATGTTGAA 
CTAAGTTTTA GAAACCTAAC GATTATAGTA GGTTCTAATT CTAGTGGTAA ATCTAATTCG
TTAGAGTCAT TAAATTTTTT CAAAGAACTG CTTGTATCAG ATTCATTATC AGCAGAAAGA
ATGCAGAGAT TATTAAGATT TGGAAATCAG AATATCTGCT CTACTATTGT TGTGGAAGAT
GATGGACAAA AAGCAGAATA TAGTGTATCA ATAACATCAA ATAAAAAACA TATCCAGATT
GCCAGTGAAA ATCTCAAGGT TAATGGTAAT GAAGTAATCA AAATTATCAA TGGTGAGGGA
GAGGTACGTG ATGAAGATGG GCAAAATCCC CAAAAATATA CATCTAATCC TGAAAGTATA
GAAGATTTAG CATTAACTTC TGCTGGCAAT TTCGGTAATA AACCTGTTAC TAAAAAATTA
GCGAGCTATA TTAGAGAATG GAAATTCTAT GATATAAATC CTAAAGATAT CAAGAAATAC
TCAACATTTC TTGAAATGGT AAAAATTGTA AGAAATACAG CAGATAATGA TATTGTTCCG
AGTCTTGATA ATGATGCTAG TGAAGTTCAA GAAATTCTAA ATTATTGGGC TAAAAATGAA
ATAAATAAAT TACGAGATGT CAGCGAAGAA CTCAGTAATT GTCTTAATAT CAGTTTAGAT
ATAGGGGTAG AAAAAGATCC AATTGTAAAA GTTTTAGAAG GTGATGGTAA AAAAATGCCC
CTGTCAAGTA TGTCAGATGG TACTCTGCGC TTGATAGCTT ATTTGATACT ATTGTATCAA
TCAGAATCAG AGATGCCTAC ACTTATTGGT ATTGAAGAAC CTGAGCGTAA TTTCCATCCG
GGGATTCTTA AAGATGTGGC TTCTATAATG AAAAGACTAT CTAAAAAAAC ACAAGTAGTT
TTTACAACTC ATAGTTCTCA ATTACTAGAT TGCTTTTCTC CAGAAGAAAT TACATCTGAT
ATATCGGTAA TACTTTTGAG TAATAAGGGT GAGTTAGGAA CGAAAGCTTG TTTACTTGAT
AAACTGGCGG AAAACCGCGA TGACCTTTTA GAGTGGATGA CTGATTTTGG ATTAGGTAGC
GCAATTTATC ATAGTCACTT AATTGAAGAA ATTTTAGCTA TTTAA
 
Protein sequence
MVMKLITAKI ENFKSLGNVE LSFRNLTIIV GSNSSGKSNS LESLNFFKEL LVSDSLSAER 
MQRLLRFGNQ NICSTIVVED DGQKAEYSVS ITSNKKHIQI ASENLKVNGN EVIKIINGEG
EVRDEDGQNP QKYTSNPESI EDLALTSAGN FGNKPVTKKL ASYIREWKFY DINPKDIKKY
STFLEMVKIV RNTADNDIVP SLDNDASEVQ EILNYWAKNE INKLRDVSEE LSNCLNISLD
IGVEKDPIVK VLEGDGKKMP LSSMSDGTLR LIAYLILLYQ SESEMPTLIG IEEPERNFHP
GILKDVASIM KRLSKKTQVV FTTHSSQLLD CFSPEEITSD ISVILLSNKG ELGTKACLLD
KLAENRDDLL EWMTDFGLGS AIYHSHLIEE ILAI