| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3556 |
|---|
| Symbol | aspA |
|---|
| ID | 3679580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 4425974 |
|---|
| End bp | 4427389 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637718907 |
|---|
| Product | aspartate ammonia-lyase |
|---|
| Protein accession | YP_324057 |
|---|
| Protein GI | 75909761 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1027] Aspartate ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACAA ATACAGATTT TCGTATTGAA CGCGATTCGA TGGGCGATCG CCAAATTGCT
AGTGATGTTT ATTACGGTAT TCAAACTCTC CGAGCCATTG AAAATTTCCC CATTAGCGGT
CTTAAGCCCT TACCTACTTA CGTAGATGCT GGTCTTCTAA TTAAAAAAGC TACAGCAATT
GTCAATGGAG AACTAGGCTG TATTCCCCAA GATATTAGCC AAGCGATTGT GCAAGCAACC
GATGAAATTC TGGCAGGGAA GTTAAGGGAT CAGTTTGTCG TGGATGTTTA TCAAGCCGGT
GCAGGGACAT CCCACCACAT GAATATTAAC GAAGTCTTAG CAAATCGGGC TTTGGAAATT
CTGGGTGAAG AAAAAGGTAA TTACAAACGA GTTAGCCCTA ATGATCATGT GAACTATGGG
CAGTCTACCA ACGATGTTAT TCCTACTGCA ATTCGCATCG GCGGCTTATT GGCACTGACC
AAAACATTAC AGCCAGCATT AGAAAAAGCG ATCGCTGCTT TAGAACACAA AGCTGTAGAA
TTTCAAGATA TTGTCAAATC CGGCAGAACC CATTTACAGG ATGCCGTTCC CGTCCGCTTG
GGTGATAATT TCGCCGCTTG GGCGCATATC CTCTCAGAAC ATCAAAACCG CATTTACACC
GCCTCTGGAG ACTTGATGGT ACTCGGTTTA GGTGGTAGTG CGGCGGGAAC AGGCTTAAAC
ACCCATCCCC AATACCGCGC CCGTGTGGTT GAAGTATTGG CAGAACTACT CAACTTACCA
CTCCAACCCG CACCCCATCT CATGGCTGCT ATGCAGAGTA TGTCCCCATT TGTGAACGTT
TCCGGGGCAA TACGCAACCT AGCCCAGGAT TTAGCAAAAA TCTCTCACGA TTTACGGCTG
ATGGACTCCG GGCCAAAAAC TGGCTTGAAA GAAATTCAAT TACCCCCAGT ACAACCCGGT
TCCTCAATCA TGCCAGGCAA ATATAACCCC GTCATGGCAG AGATGACATC GATGGTGTGT
TTCCAGGTGA TGGGTTACGA TCAGGCGATC GCTCTTGCAG CCCAAGCCGG ACAATTAGAA
TTAAACGTGA TGATGCCGTT GATTGCCTAT GATTTAATTC ACAGCATCGA AATTCTGGGG
TCAACTATCG CCGCCCTCAC AGAACGCTGT ATTCAAGGAA TTACCGCCAA CAAAGAACGG
TGTTTAGCCT ACGCCGAAGG CAGTTTAGCT TTAGTTACTG CCCTCAACAC TCATATTGGT
TATTTAAATG CCGCAGATGT TGCCAAAGAA TCTTTAAACA CAGGAAAATC TCTACGGCAG
ATTGTGTTAG AAAAAGGACT GATGAGCGAA GCAGAGTTAG CCACTGTGCT AAATCTAGAA
GAAATGAGTA GTATATTGCC ACTCCAGGCA GAGTAA
|
|---|
| Protein sequence | MTTNTDFRIE RDSMGDRQIA SDVYYGIQTL RAIENFPISG LKPLPTYVDA GLLIKKATAI
VNGELGCIPQ DISQAIVQAT DEILAGKLRD QFVVDVYQAG AGTSHHMNIN EVLANRALEI
LGEEKGNYKR VSPNDHVNYG QSTNDVIPTA IRIGGLLALT KTLQPALEKA IAALEHKAVE
FQDIVKSGRT HLQDAVPVRL GDNFAAWAHI LSEHQNRIYT ASGDLMVLGL GGSAAGTGLN
THPQYRARVV EVLAELLNLP LQPAPHLMAA MQSMSPFVNV SGAIRNLAQD LAKISHDLRL
MDSGPKTGLK EIQLPPVQPG SSIMPGKYNP VMAEMTSMVC FQVMGYDQAI ALAAQAGQLE
LNVMMPLIAY DLIHSIEILG STIAALTERC IQGITANKER CLAYAEGSLA LVTALNTHIG
YLNAADVAKE SLNTGKSLRQ IVLEKGLMSE AELATVLNLE EMSSILPLQA E
|
|---|
| |