Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3536 |
Symbol | |
ID | 3679560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4400271 |
End bp | 4402796 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637718888 |
Product | cyclic nucleotide-binding domain-containing protein |
Protein accession | YP_324038 |
Protein GI | 75909742 |
COG category | [C] Energy production and conversion [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0348] Polyferredoxin [COG1221] Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCTC CAAACACAGT TATATGGCTA CGAGAACGGA CAACTTTAGG TATTCTCTCA TCGATGGTGT TGGATGCGAT CGCCCAAACT CTAGAAGAGC AAGTTGTACC AGCCAACAGT ACTCTAGTTT TAGAAGCCAC TCACCCAGAA GCACTGTATA TTGTCCAAGA TGGTCAACTA GAAAGTGAAA CTACTAATCA AAATAGTTCC GTTTTAGCTC GTGGGTTTCT ACCTGGAGCA GTCATCAATC TGCAAGAATT ACTTTTGGAT GAATTAACAC CATGTAAAAT TGTCACCTTG ACAGAATCTC ATGTGTGGGC CATACCTACG GCTAAATTTC GGGAATTAAT TAGCCAATAC CCGGAGATTA ATCAGGCTTT TTCTCGACAA TTAGCCCAGG AATTAGCCCA GGTGACATCT GCGTTAACCT ATGAACAAGA ACGTTCTGTA GCGTTGCGTC CCTATTTAGT TACCAAAGCA CAACGGGGAA TTGTGGGTAC GAGTCGCTAC GCTGTGCGTC TGCGAGAGCA AATTCGCGGT GCGGCGGCTG ACCGCAAATC TGTAGAAATC TTTGGCGAAC CAGGTTTAGA AAAAGATAAT ATCGCTACTC TCATTCACTT TAGTTCCCCC AAGCGACGGG AACCGATTAT TAAAATCAAT TGTGGGATTT TGCAGACAAG CGGTGCAGAT TTATTTGGTC GCGCTGGCGG TAAACCTGGA CTTTTGGAGT GGTTGGGGGA AGGTAGTTTA ATTCTCAACA ATATCCAAGA ATTACCCCCA GAGTTATTAC AGCCTGTAGC GCAGTTACTG CAAACAAATA CATATACTCC CGTTTCTCGA CCAGGAGAAC CAGCTGCTAC ACCCCGTACC AGTAAAGCCC GGATTCTACT TGTGTCGGAA AAAACCGAGT CTAAGATTGA GCGTTGTGTG GGACATATTA TTAAAGTACC ACCGCTACGG GTAAGGAAAG CTGATATTAA AGCCCAGGTA GAATATTATA CTAGTTTGTA TGTGCGATCG CGTGGAGTGA AGAAACCCCA TATTACCCCA GAAGCTTTAC GCCGCCTACA ATCTTACGAT TTCCCCGGTA ATCTCAAGGA GCTAAAAAAC CTTGTAGAAA GGGCAATTGT CCAAGCAGGG GAACGCAGGG AATTAACAGA AGAAATATTT TGGGCGGCTG AACCTAAGAA AAAACAATTT CGGGTCAATC TTTTAAATCT TTATCCAGGA TTGCGACGGT TCTTACGCAG TTCTTGGTGG CCTGACAAGA TTAACTATGG TTTTACAGTT GTAGCGTTTG CATTTATTGT ATGCGTTCTG TTTCTCGGCC CGCAAACACG CGATCGCAAT TTTGCTTTAA ATTTATTTTG GGCTTGGTGG TGGCCTCTCA TCCTCTTGAT TTTTCCCTTC TTCGGGCGTG TGTGGTGTGC TGTCTGTCCC TTCATGATTT ACGGCGAAAT CACCCAAAAA CTCTCTCTGT GGCTATTCCC CCGCCAACTC AAGCGCTGGC CGCGAGAACA AGCAGAAAAA TGGGGTGGAT GGTTTCTATT TGGTTTATTT ACCTTAATTT TCCTGTGGGA AGAACTTTGG CATTTAGAAA ATACAGCCTA TCTTTCCGCT TGTCTACTAT TATTAATTAC CTCTGGGGCA ATGATTTTTT CTGCCCTGTT TGAGCGACGT TTTTGGTGTC GCTATCTTTG TCCCATCGGG GGAATGAATG GTTTGTTTGC TAAACTTTCC ATGACTGAAC TAAGAGCGCA GCAAGGTATT TGTTCTGCTA CCTGTAATAC CTATCAATGT TATAAAGGCG GCCCCGAAAA AGGCGAAGGG ATGGAAACAG ATGGTTGTCC TTTATATTCT CATCCAGCCC AGTTGGAAGA TAACCGAGAT TGTGTACTTT GTATGACTTG TCTTAAAGCT TGTCCCCATC GCTCTGTAGA GTTTAACTTG CGTCCCCCTG GCATTGAACT TTGGACAACT CATGTACCCC ACAATTATGA AGTGGCTTTG TTATTTTTGC TATTAGGGGG AATATATCTC CATCGTTTAC CAGAGTTGTT AGATTGGCTA GGTTTACAAC TTGATTTAAC TCAATTTTGG CTACATTTGG GAATATCAAT TTTGGCATTA TTAATGCCAT CTGCTATTAT TTTATCCACC TACGGTTTAA TTAAAATCTT CAATACTCGC CGTAAACCTC GACGCTTTAT TGAACTTGCT TATGGTTATT TGCCATTAGT TTTAGGGGGA AATTTCGCTC ACTATCTACG TTTAGGTTTA GGTGAAAGTG GCAAGATTCT CCCCGTTACT TTTGCCACCT TTGGTCTGAG TGGTGAGCAA TTACCAATAT TAGTAGCGCA CCCAGCCGTG ATTGCCTTTT TACAAGGTGC AACTCTCATT TTTTCCGTGC TGTTGACGAT AGTATTGACG CAAAAAATTG CCAGACAACC ATTGAGAACA TTACTTTGGC AACACCTCTC AGCTATTATT TTGGGTATAA GTATGTGGAT AATTATTGTT CTTTAG
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Protein sequence | MTSPNTVIWL RERTTLGILS SMVLDAIAQT LEEQVVPANS TLVLEATHPE ALYIVQDGQL ESETTNQNSS VLARGFLPGA VINLQELLLD ELTPCKIVTL TESHVWAIPT AKFRELISQY PEINQAFSRQ LAQELAQVTS ALTYEQERSV ALRPYLVTKA QRGIVGTSRY AVRLREQIRG AAADRKSVEI FGEPGLEKDN IATLIHFSSP KRREPIIKIN CGILQTSGAD LFGRAGGKPG LLEWLGEGSL ILNNIQELPP ELLQPVAQLL QTNTYTPVSR PGEPAATPRT SKARILLVSE KTESKIERCV GHIIKVPPLR VRKADIKAQV EYYTSLYVRS RGVKKPHITP EALRRLQSYD FPGNLKELKN LVERAIVQAG ERRELTEEIF WAAEPKKKQF RVNLLNLYPG LRRFLRSSWW PDKINYGFTV VAFAFIVCVL FLGPQTRDRN FALNLFWAWW WPLILLIFPF FGRVWCAVCP FMIYGEITQK LSLWLFPRQL KRWPREQAEK WGGWFLFGLF TLIFLWEELW HLENTAYLSA CLLLLITSGA MIFSALFERR FWCRYLCPIG GMNGLFAKLS MTELRAQQGI CSATCNTYQC YKGGPEKGEG METDGCPLYS HPAQLEDNRD CVLCMTCLKA CPHRSVEFNL RPPGIELWTT HVPHNYEVAL LFLLLGGIYL HRLPELLDWL GLQLDLTQFW LHLGISILAL LMPSAIILST YGLIKIFNTR RKPRRFIELA YGYLPLVLGG NFAHYLRLGL GESGKILPVT FATFGLSGEQ LPILVAHPAV IAFLQGATLI FSVLLTIVLT QKIARQPLRT LLWQHLSAII LGISMWIIIV L
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