Gene Ava_3495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3495 
Symbol 
ID3679768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4335160 
End bp4337070 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content39% 
IMG OID637718847 
ProductTn7-like transposition protein D 
Protein accessionYP_323997 
Protein GI75909701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.178202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0885981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGTT TTTTCCCTCA ACCTTATCCA GATGAAATTT TATATAGTGT TATTGCTCGT 
TATCACATTA GAAGTGGCAA TACGAGTCCA AAAATTACAT TACAAGATTT ATTTAAGTCA
CAGACTACTG TGGCGACAGT AGATTTACCA TCGAACCTTA GTAATTTAAT TAAAAACCTA
CAATTTATCT CAAATTACCA AGTTGAAGAG TTGATATATA AACATACTCT CTACCCTTTA
TATAGCCCTT TTTTGCCAGC AAACAGGTCT AGTCAGGTAC TGGAATCTAT GAAAGGAGAT
TATGGGGGAG ATATTCATAC AAGAGCCGGA ATTATGGCAA GCTCAATTAC TATGCCGAAA
TATTTGCGGT TTTGTCCAAC TTGCTGGGAA GAAGACTTAA AAAATTATGG CGAACCTTAC
TGGCATCGCA TCCATCAAAT ACCAGGGATT TTAGTTTGTC CATTTCATGG TGAAGTTTTG
CAAGATAGCC TAGCTCCTTT ACATGGTTTT AATAAGCATG AATATTATGC AGCTAGTACA
GACAACTGTT CTATTACTAA AGAACCCAGT ATTCTTAGCC CTGACACACT GAAAAAATTA
CTAATATTAG CCAAAGATTT TTGGTGGTTA CTCAATAGTG AAATACCTTG CCAAGAGCCA
CAGTGGTTTC GCAAACAGTA CACAAATCTG ATGATTGAGC AGGGTTTTGC AACTCCAACT
GGTCGAATTT ACCAGAACAA ACTACTAGAT AATTTTTTGT TCTTTTATGG TCAAGAAATG
CTCAGTGCTG TTGATTCAAT GGTAAATCAT AATGATTCAA ACAACTGGGT TACTAGCATC
GTCAGGAAAT ATAGGAAATC TTTCCATCCT CTTAGACATC TGCTAATGAT GCGTTTTTTG
AAAACATCAG TAGAGGAATT TTTTCAAAAA GATACTGAAT ACAAGCCTTT TGGCGAACCC
CCCTGGTTGT GTCTCAATGC TGCCGCAGAA CATTATCTAC AACCAGTGAT TACCAATTTA
GTCATTACTT TATGCTGCGA TACAAAAAAG CCTGTCGGTA CTTTTTCTTG TGCTTGCGGA
ATGGTTTATT GCCGGACTGG GCCTGATGAA ACGGATGAAG ACAAAGTTCG CATTGGTAAA
GTCAAGGCAT TCGGTCAAAT ATGGGAGCAA AAGCTGAAAG AATTGGTGGA AGTTGAAAAG
TTGGGTTTGC GGGAGACAGC CAGAAGATTA AATGTTGATG CCAGAACTAT CAAACGTTAT
GTATCTCGTC TAAAATTGAC AACTTATTGG CAGACTAGAA CAGAAAATGA CTCTGTAGGC
TTACAGGGAG TCCCAGAAAT AGATCCCAAT TTTGCAACTG AACTCAAATT AAAACACAGG
CAAAATTGGA TGGCTTTACA AGTACAGAAC CCTGAAGCTT CAAAGACAAC TCTGAGAAAA
CTAGTACCAG CCACCTATAT TTGGCTATAC AGGAATGACA GAGAATGGCT CAATCAAAAC
TCACCCACTT TACAAGTTGC CGTTCCTTCC GTTGTGAGAG TTGATTGGCA TGAGCGAGAT
CAGCAAATTC TCGCTCAGGT TCAAGATGCA GTGCGATCGC TACTTAAGGC TGATATACCA
GAGAAAATTT CTATTAGTAG GGTAGGGAAA ACTATCGGCT TACTTGCATT ACTCGAAAAA
CATCTCGACC AGATGCCTTT AACAAAGGCT TATTTGGAAT CAGTCGTTGA AACTGTAGAA
GAATTTCAGA TGCGCCGGAT CAAGTGGGCA ATCAAGCTGC TTGATGAATG TGGAGAAGAA
ATTATGCGCT GGAAGGTAGT CAGAGTTGCT GCTTTGCGAG AGGATTGCTC CCAAAGAGTC
AGTGCATTTC TGGAAAGTGA ACTGGAGAAA GCATACAAGA AAGAGAGGTG A
 
Protein sequence
MVSFFPQPYP DEILYSVIAR YHIRSGNTSP KITLQDLFKS QTTVATVDLP SNLSNLIKNL 
QFISNYQVEE LIYKHTLYPL YSPFLPANRS SQVLESMKGD YGGDIHTRAG IMASSITMPK
YLRFCPTCWE EDLKNYGEPY WHRIHQIPGI LVCPFHGEVL QDSLAPLHGF NKHEYYAAST
DNCSITKEPS ILSPDTLKKL LILAKDFWWL LNSEIPCQEP QWFRKQYTNL MIEQGFATPT
GRIYQNKLLD NFLFFYGQEM LSAVDSMVNH NDSNNWVTSI VRKYRKSFHP LRHLLMMRFL
KTSVEEFFQK DTEYKPFGEP PWLCLNAAAE HYLQPVITNL VITLCCDTKK PVGTFSCACG
MVYCRTGPDE TDEDKVRIGK VKAFGQIWEQ KLKELVEVEK LGLRETARRL NVDARTIKRY
VSRLKLTTYW QTRTENDSVG LQGVPEIDPN FATELKLKHR QNWMALQVQN PEASKTTLRK
LVPATYIWLY RNDREWLNQN SPTLQVAVPS VVRVDWHERD QQILAQVQDA VRSLLKADIP
EKISISRVGK TIGLLALLEK HLDQMPLTKA YLESVVETVE EFQMRRIKWA IKLLDECGEE
IMRWKVVRVA ALREDCSQRV SAFLESELEK AYKKER