Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3495 |
Symbol | |
ID | 3679768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4335160 |
End bp | 4337070 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637718847 |
Product | Tn7-like transposition protein D |
Protein accession | YP_323997 |
Protein GI | 75909701 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.178202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0885981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAGTT TTTTCCCTCA ACCTTATCCA GATGAAATTT TATATAGTGT TATTGCTCGT TATCACATTA GAAGTGGCAA TACGAGTCCA AAAATTACAT TACAAGATTT ATTTAAGTCA CAGACTACTG TGGCGACAGT AGATTTACCA TCGAACCTTA GTAATTTAAT TAAAAACCTA CAATTTATCT CAAATTACCA AGTTGAAGAG TTGATATATA AACATACTCT CTACCCTTTA TATAGCCCTT TTTTGCCAGC AAACAGGTCT AGTCAGGTAC TGGAATCTAT GAAAGGAGAT TATGGGGGAG ATATTCATAC AAGAGCCGGA ATTATGGCAA GCTCAATTAC TATGCCGAAA TATTTGCGGT TTTGTCCAAC TTGCTGGGAA GAAGACTTAA AAAATTATGG CGAACCTTAC TGGCATCGCA TCCATCAAAT ACCAGGGATT TTAGTTTGTC CATTTCATGG TGAAGTTTTG CAAGATAGCC TAGCTCCTTT ACATGGTTTT AATAAGCATG AATATTATGC AGCTAGTACA GACAACTGTT CTATTACTAA AGAACCCAGT ATTCTTAGCC CTGACACACT GAAAAAATTA CTAATATTAG CCAAAGATTT TTGGTGGTTA CTCAATAGTG AAATACCTTG CCAAGAGCCA CAGTGGTTTC GCAAACAGTA CACAAATCTG ATGATTGAGC AGGGTTTTGC AACTCCAACT GGTCGAATTT ACCAGAACAA ACTACTAGAT AATTTTTTGT TCTTTTATGG TCAAGAAATG CTCAGTGCTG TTGATTCAAT GGTAAATCAT AATGATTCAA ACAACTGGGT TACTAGCATC GTCAGGAAAT ATAGGAAATC TTTCCATCCT CTTAGACATC TGCTAATGAT GCGTTTTTTG AAAACATCAG TAGAGGAATT TTTTCAAAAA GATACTGAAT ACAAGCCTTT TGGCGAACCC CCCTGGTTGT GTCTCAATGC TGCCGCAGAA CATTATCTAC AACCAGTGAT TACCAATTTA GTCATTACTT TATGCTGCGA TACAAAAAAG CCTGTCGGTA CTTTTTCTTG TGCTTGCGGA ATGGTTTATT GCCGGACTGG GCCTGATGAA ACGGATGAAG ACAAAGTTCG CATTGGTAAA GTCAAGGCAT TCGGTCAAAT ATGGGAGCAA AAGCTGAAAG AATTGGTGGA AGTTGAAAAG TTGGGTTTGC GGGAGACAGC CAGAAGATTA AATGTTGATG CCAGAACTAT CAAACGTTAT GTATCTCGTC TAAAATTGAC AACTTATTGG CAGACTAGAA CAGAAAATGA CTCTGTAGGC TTACAGGGAG TCCCAGAAAT AGATCCCAAT TTTGCAACTG AACTCAAATT AAAACACAGG CAAAATTGGA TGGCTTTACA AGTACAGAAC CCTGAAGCTT CAAAGACAAC TCTGAGAAAA CTAGTACCAG CCACCTATAT TTGGCTATAC AGGAATGACA GAGAATGGCT CAATCAAAAC TCACCCACTT TACAAGTTGC CGTTCCTTCC GTTGTGAGAG TTGATTGGCA TGAGCGAGAT CAGCAAATTC TCGCTCAGGT TCAAGATGCA GTGCGATCGC TACTTAAGGC TGATATACCA GAGAAAATTT CTATTAGTAG GGTAGGGAAA ACTATCGGCT TACTTGCATT ACTCGAAAAA CATCTCGACC AGATGCCTTT AACAAAGGCT TATTTGGAAT CAGTCGTTGA AACTGTAGAA GAATTTCAGA TGCGCCGGAT CAAGTGGGCA ATCAAGCTGC TTGATGAATG TGGAGAAGAA ATTATGCGCT GGAAGGTAGT CAGAGTTGCT GCTTTGCGAG AGGATTGCTC CCAAAGAGTC AGTGCATTTC TGGAAAGTGA ACTGGAGAAA GCATACAAGA AAGAGAGGTG A
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Protein sequence | MVSFFPQPYP DEILYSVIAR YHIRSGNTSP KITLQDLFKS QTTVATVDLP SNLSNLIKNL QFISNYQVEE LIYKHTLYPL YSPFLPANRS SQVLESMKGD YGGDIHTRAG IMASSITMPK YLRFCPTCWE EDLKNYGEPY WHRIHQIPGI LVCPFHGEVL QDSLAPLHGF NKHEYYAAST DNCSITKEPS ILSPDTLKKL LILAKDFWWL LNSEIPCQEP QWFRKQYTNL MIEQGFATPT GRIYQNKLLD NFLFFYGQEM LSAVDSMVNH NDSNNWVTSI VRKYRKSFHP LRHLLMMRFL KTSVEEFFQK DTEYKPFGEP PWLCLNAAAE HYLQPVITNL VITLCCDTKK PVGTFSCACG MVYCRTGPDE TDEDKVRIGK VKAFGQIWEQ KLKELVEVEK LGLRETARRL NVDARTIKRY VSRLKLTTYW QTRTENDSVG LQGVPEIDPN FATELKLKHR QNWMALQVQN PEASKTTLRK LVPATYIWLY RNDREWLNQN SPTLQVAVPS VVRVDWHERD QQILAQVQDA VRSLLKADIP EKISISRVGK TIGLLALLEK HLDQMPLTKA YLESVVETVE EFQMRRIKWA IKLLDECGEE IMRWKVVRVA ALREDCSQRV SAFLESELEK AYKKER
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