Gene Ava_3489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3489 
Symbol 
ID3679762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4328895 
End bp4329845 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content34% 
IMG OID637718841 
ProductTn7-like transposition protein D 
Protein accessionYP_323991 
Protein GI75909695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0155842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0624831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGTT TTTTCCCAAC TCTGTATCCC GATGAACTTT TATATAGCAC TTTAGCTAGA 
TACCATATTC GGAGTGGAAA TAAAAGTTTC AAGCAAACTG ACTTAGAGCT ATTCGGTTAC
AGTTCCCAAC AAATATGCAA AATTACCTTA ACTAATAATT TAAATTATTT AGTGAAAAAC
TTACCTTTAC GCTCCCAGCA AAAAGTTGAG AATTTACTAC AAAATCATAC TTTATATTCC
TTTTATGCAA CTTTATTAAT GCCGCAGGAG GCTTGGCTGC TGAAAAACTC AATGAGTAAT
AAATTCAGTG GGTCTATACT AGATTTTGCT AAAGTGGCTA ATAATTCTAG TGATGATTCA
AAAAAATTTT TAAAATTTTG CCCTGAATGT TTAGAGAAAG ATACCCAAAA GTATGGTGAA
CCTTACTGGC ATAGAATACA TCAAGTCCCT GGCATTTTAG TTTGTCCAAT TCATCGTGTT
GTTTTACACA ATAGCTGTAT AGAAGTTGAA TCGAAAGGCA TACATTATCA TGCTGCCAGC
ATAGATAATT GTTTATTAGC AAATAATGTG AAAAAATTGA CAAATAAAAC TGTAGAAACA
CTTTCAATAC TGGCACATGA TATTAATTGG CTAATTCATA GCAGTTTTGC CTTTCAAGGT
TTGGCTTGGC TTCGCGCTCA GTACCAGCGT TACTTATTGG ATAAAGGACT GCTAAAAACC
TTTGCTGGTG GCAAGTTTAA GTTTAATGAT TGTGGTTTTG CCCAGCTTAT ATTTGAGTTT
TATGGTCAAG AATCCTTAGA AGCCCTCAAT CCAAAGCTGA CCCAAAATCA AGGTAAATAT
TTTTCTCACT GCTTGTTTGG ATGCGACTTA AACCCAGCAA TTGACCGCAT AACTCATATC
TTAATGATAA AATTTTTAGC AAATTCTATA GAAGAGTTCT TTCAGTCATA A
 
Protein sequence
MLSFFPTLYP DELLYSTLAR YHIRSGNKSF KQTDLELFGY SSQQICKITL TNNLNYLVKN 
LPLRSQQKVE NLLQNHTLYS FYATLLMPQE AWLLKNSMSN KFSGSILDFA KVANNSSDDS
KKFLKFCPEC LEKDTQKYGE PYWHRIHQVP GILVCPIHRV VLHNSCIEVE SKGIHYHAAS
IDNCLLANNV KKLTNKTVET LSILAHDINW LIHSSFAFQG LAWLRAQYQR YLLDKGLLKT
FAGGKFKFND CGFAQLIFEF YGQESLEALN PKLTQNQGKY FSHCLFGCDL NPAIDRITHI
LMIKFLANSI EEFFQS