Gene Ava_3484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3484 
Symbol 
ID3679757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4321578 
End bp4321823 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content51% 
IMG OID637718836 
Productphotosystem I subunit VII 
Protein accessionYP_323986 
Protein GI75909690 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR03048] photosystem I iron-sulfur protein PsaC 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.882203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.40097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCATA CCGTAAAAAT CTACGATACC TGCATTGGCT GCACTCAATG TGTCCGCGCC 
TGCCCTACTG ACGTTCTGGA GATGGTTCCT TGGGATGGCT GTAAGGCTGC TCAAGTCGCT
TCTTCACCCC GTACAGAAGA CTGCGTAGGC TGCAAGCGTT GTGAAACAGC TTGCCCGACT
GACTTCTTGA GCATTCGGGT TTATCTGGGT GCAGAAACAA CTCGCAGCAT GGGTCTAGCT
TACTAA
 
Protein sequence
MSHTVKIYDT CIGCTQCVRA CPTDVLEMVP WDGCKAAQVA SSPRTEDCVG CKRCETACPT 
DFLSIRVYLG AETTRSMGLA Y